RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LMBR1Q8WVP7 490 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 TGS1Q96RS0 853 aaKnown RBP13.56□□□□□ -0.24
ACTN4-206ENST00000489451 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 NOP56O00567 594 aaKnown RBP13.55□□□□□ -0.24
ACTN4-206ENST00000489451 EFCAB14O75071 495 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 LINC00271P0C7V0 271 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 ITGB5P18084 799 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 SMARCA1P28370 1054 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 SP4Q02446 784 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 NEDD9Q14511 834 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 NECTIN1Q15223 517 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 UBE2SQ16763 222 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 GNPTABQ3T906 1256 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 RUFY4Q6ZNE9 571 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 MYOCDQ8IZQ8 938 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 RRP36Q96EU6 259 aaKnown RBP13.55□□□□□ -0.24
ACTN4-206ENST00000489451 SENP7Q9BQF6 1050 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 USP26Q9BXU7 913 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 LRRC2Q9BYS8 371 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 LMCD1Q9NZU5 365 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 EMSYQ7Z589 1322 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 RALGAPA2Q2PPJ7 1873 aa13.55□□□□□ -0.24
ACTN4-206ENST00000489451 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 GSTTP1A0A1W2PQM5 241 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 MGAT3Q09327 533 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 FAM26DQ5JW98 314 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 UTP14CQ5TAP6 766 aaKnown RBP13.54□□□□□ -0.24
ACTN4-206ENST00000489451 TYW1BQ6NUM6 668 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 CTCFLQ8NI51 663 aaPredicted RBP13.54□□□□□ -0.24
ACTN4-206ENST00000489451 SMARCC2Q8TAQ2 1214 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 HLA-CQ95604 372 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 ESYT1Q9BSJ8 1104 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 MTA3Q9BTC8 594 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 CD320Q9NPF0 282 aa13.54□□□□□ -0.24
ACTN4-206ENST00000489451 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
ACTN4-206ENST00000489451 CAND2O75155 1236 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 CHRNA1P02708 482 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 LIFRP42702 1097 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 CREB3L3Q68CJ9 461 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 TMTC3Q6ZXV5 915 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 TOP1MTQ969P6 601 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 ZBTB10Q96DT7 871 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 PCYT2Q99447 389 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 UBIAD1Q9Y5Z9 338 aa13.53□□□□□ -0.24
ACTN4-206ENST00000489451 LOXHD1Q8IVV2 1947 aa13.52□□□□□ -0.24
ACTN4-206ENST00000489451 AMHP03971 560 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 KIF5BP33176 963 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 MCM5P33992 734 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 TCF7P36402 384 aaPredicted RBP13.52□□□□□ -0.25
ACTN4-206ENST00000489451 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 FUT2Q10981 343 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 XRRA1Q6P2D8 792 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 CCDC82Q8N4S0 544 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 GPRASP2Q96D09 838 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 LZTS2Q9BRK4 669 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 EHMT1Q9H9B1 1298 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 RC3H2Q9HBD1 1191 aaKnown RBP13.52□□□□□ -0.25
ACTN4-206ENST00000489451 CNTNAP5Q8WYK1 1306 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 KIAA1671Q9BY89 1806 aa13.52□□□□□ -0.25
ACTN4-206ENST00000489451 WDFY4Q6ZS81 3184 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 NRCAMQ92823 1304 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 MBLAC1A4D2B0 266 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-206ENST00000489451 ALADP13716 330 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 MARK3P27448 753 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 EPC2Q52LR7 807 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 RPAINQ86UA6 219 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 FBXO22Q8NEZ5 403 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-206ENST00000489451 CYP2W1Q8TAV3 490 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 LINC01599Q8WXQ3 324 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 SEPT8Q92599 483 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 CUL5Q93034 780 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 PHOX2BQ99453 314 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 UBE2ZQ9H832 354 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-206ENST00000489451 PSTPIP2Q9H939 334 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 PKD2L1Q9P0L9 805 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
ACTN4-206ENST00000489451 ZNF215Q9UL58 517 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-206ENST00000489451 PCDHA6Q9UN73 950 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 PCDHA8Q9Y5H6 950 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 TTC3P53804 2025 aa13.51□□□□□ -0.25
ACTN4-206ENST00000489451 MYO7AQ13402 2215 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 CCDC69A6NI79 296 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 UPP2O95045 317 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 GHRP10912 638 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 GNAQP50148 359 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 LPIN1Q14693 890 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 GRIK4Q16099 956 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 WWC2Q6AWC2 1192 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 NLRX1Q86UT6 975 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 FANCBQ8NB91 859 aa13.5□□□□□ -0.25
ACTN4-206ENST00000489451 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms