RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 PABPC5Q96DU9 382 aaKnown RBP13.24□□□□□ -0.29
USP11-210ENST00000489030 PIGSQ96S52 555 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 PHOX2BQ99453 314 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 IFIH1Q9BYX4 1025 aaKnown RBP13.24□□□□□ -0.29
USP11-210ENST00000489030 KRT23Q9C075 422 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 MAF1Q9H063 256 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 TUT1Q9H6E5 874 aaKnown RBP13.24□□□□□ -0.29
USP11-210ENST00000489030 CLDND1Q9NY35 253 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 PCDHA1Q9Y5I3 950 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 TAF6LQ9Y6J9 622 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 TECTAO75443 2155 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 ZBTB5O15062 677 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 LINC01565O15544 149 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 DCXO43602 365 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 CHRNA1P02708 482 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 PSMA5P28066 241 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 IRS1P35568 1242 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 ADAM17P78536 824 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 HYAL1Q12794 435 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 PTPROQ16827 1216 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 TIGD5Q53EQ6 642 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 HFE2Q6ZVN8 426 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 ZBTB10Q96DT7 871 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 GPR20Q99678 358 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
USP11-210ENST00000489030 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 RTEL1Q9NZ71 1219 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 COL4A6Q14031 1691 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 DOCK5Q9H7D0 1870 aa13.23□□□□□ -0.29
USP11-210ENST00000489030 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
USP11-210ENST00000489030 HMGB1P09429 215 aaKnown RBP13.22□□□□□ -0.29
USP11-210ENST00000489030 ALADP13716 330 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 CTNNB1P35222 781 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 SP4Q02446 784 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 CAMK1Q14012 370 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 IFIT1BQ5T764 474 aaKnown RBP13.22□□□□□ -0.29
USP11-210ENST00000489030 UTP14CQ5TAP6 766 aaKnown RBP13.22□□□□□ -0.29
USP11-210ENST00000489030 CYFIP1Q7L576 1253 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 RALYLQ86SE5 291 aaKnown RBP13.22□□□□□ -0.29
USP11-210ENST00000489030 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 LMBR1Q8WVP7 490 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 TBC1D32Q96NH3 1257 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 NEK1Q96PY6 1258 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 RC3H2Q9HBD1 1191 aaKnown RBP13.22□□□□□ -0.29
USP11-210ENST00000489030 MUTYHQ9UIF7 546 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 C5orf42Q9H799 3197 aa13.22□□□□□ -0.29
USP11-210ENST00000489030 WDFY4Q6ZS81 3184 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
USP11-210ENST00000489030 TBX10O75333 385 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 GHRP10912 638 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 CCND2P30279 289 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 ARHGAP4P98171 946 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 CTC1Q2NKJ3 1217 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 CCDC178Q5BJE1 867 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 FAM26DQ5JW98 314 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 ADHFE1Q8IWW8 467 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 LINC01599Q8WXQ3 324 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 UBAC1Q9BSL1 405 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 TM6SF1Q9BZW5 370 aa13.21□□□□□ -0.29
USP11-210ENST00000489030 NLRC5Q86WI3 1866 aa13.21□□□□□ -0.3
USP11-210ENST00000489030 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 MBTPS2O43462 519 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 TGFB3P10600 412 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 DNAJB1P25685 340 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 MGAT3Q09327 533 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 LPIN1Q14693 890 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 GRM4Q14833 912 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 CSPP1Q1MSJ5 1256 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 PUS10Q3MIT2 529 aaKnown RBP13.2□□□□□ -0.3
USP11-210ENST00000489030 KCNV1Q6PIU1 500 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 SAMD11Q96NU1 681 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 INPP4AQ96PE3 977 aaPredicted RBP13.2□□□□□ -0.3
USP11-210ENST00000489030 RIOX1Q9H6W3 641 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
USP11-210ENST00000489030 TRIOO75962 3097 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 FRMPD4Q14CM0 1322 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 ZDBF2Q9HCK1 2354 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 C5orf67F2Z3F1 127 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 NOP56O00567 594 aaKnown RBP13.19□□□□□ -0.3
USP11-210ENST00000489030 ICAM3P32942 547 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 MCM5P33992 734 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 BMPR1AP36894 532 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 METTL7BQ6UX53 244 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 ADGRD2Q7Z7M1 963 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 FIBCD1Q8N539 461 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 JAKMIP1Q96N16 626 aaKnown RBP13.19□□□□□ -0.3
USP11-210ENST00000489030 IGFLR1Q9H665 355 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 EHMT1Q9H9B1 1298 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 ALG13Q9NP73 1137 aaKnown RBP13.19□□□□□ -0.3
USP11-210ENST00000489030 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
USP11-210ENST00000489030 ADGRA3Q8IWK6 1321 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 ENPP3O14638 875 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms