RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 NOC4LQ9BVI4 516 aaKnown RBP15.61■□□□□ 0.09
RER1-207ENST00000488353 ZSCAN5CA6NGD5 496 aaPredicted RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 LDHCP07864 332 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 GBP2P32456 591 aaPredicted RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 HSPA9P38646 679 aaKnown RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 PDE4DQ08499 809 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 KLHDC7AQ5VTJ3 777 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 CABP7Q86V35 215 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 ZSCAN29Q8IWY8 852 aaPredicted RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 HPS3Q969F9 1004 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 MS4A14Q96JA4 679 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 NOX5Q96PH1 765 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 DUSP9Q99956 384 aaKnown RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 VAT1LQ9HCJ6 419 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 PLCB1Q9NQ66 1216 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 KBTBD4Q9NVX7 518 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 BICDL2A1A5D9 508 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 F8W031 263 aaPredicted RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 NKRFO15226 690 aaKnown RBP eCLIP15.6■□□□□ 0.093e-7■□□□□ 10
RER1-207ENST00000488353 CCNT1O60563 726 aaKnown RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 RHOBTB3O94955 611 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 FCER1AP12319 257 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 EIF4A3P38919 411 aaKnown RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 MAGEA1P43355 309 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 MTIF2P46199 727 aaKnown RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 GTF2IP78347 998 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 ANKRD40Q6AI12 368 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 TMED8Q6PL24 325 aaPredicted RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 COL23A1Q86Y22 540 aaPredicted RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 GPIHBP1Q8IV16 184 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 CASKIN2Q8WXE0 1202 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 RSRC1Q96IZ7 334 aaKnown RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 CNOT6LQ96LI5 555 aaKnown RBP15.6■□□□□ 0.09
RER1-207ENST00000488353 TMEM47Q9BQJ4 181 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 BARHL2Q9NY43 387 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 SLC12A6Q9UHW9 1150 aa15.6■□□□□ 0.09
RER1-207ENST00000488353 C5orf60A6NFR6 353 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 STK4Q13043 487 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 BIRC3Q13489 604 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 ZKSCAN8Q15776 578 aaPredicted RBP15.59■□□□□ 0.09
RER1-207ENST00000488353 SPRED3Q2MJR0 410 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 CRAMP1Q96RY5 1269 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 GRID2IPA4D2P6 1211 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 KLRF2D3W0D1 207 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 DNAJC8O75937 253 aaPredicted RBP15.59■□□□□ 0.09
RER1-207ENST00000488353 TECP42680 631 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 GNAQP50148 359 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 NAPAP54920 295 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 ASIC1P78348 528 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 NAA25Q14CX7 972 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 MIIPQ5JXC2 388 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 RUFY4Q6ZNE9 571 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 MAB21L3Q8N8X9 362 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 EIF1ADQ8N9N8 165 aaKnown RBP15.59■□□□□ 0.09
RER1-207ENST00000488353 HOOK2Q96ED9 719 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 CCSER1Q9C0I3 900 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 KDM4CQ9H3R0 1056 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 TCP11L1Q9NUJ3 509 aa15.59■□□□□ 0.09
RER1-207ENST00000488353 GPR75-ASB3A0A0A6YYF3 556 aa15.58■□□□□ 0.09
RER1-207ENST00000488353 ECM2O94769 699 aaPredicted RBP15.58■□□□□ 0.09
RER1-207ENST00000488353 GHRP10912 638 aa15.58■□□□□ 0.09
RER1-207ENST00000488353 QPCTQ16769 361 aa15.58■□□□□ 0.09
RER1-207ENST00000488353 GKAP1Q5VSY0 366 aaPredicted RBP15.58■□□□□ 0.09
RER1-207ENST00000488353 MSL1Q68DK7 614 aa15.58■□□□□ 0.09
RER1-207ENST00000488353 MXD3Q9BW11 206 aa15.58■□□□□ 0.09
RER1-207ENST00000488353 SALL4Q9UJQ4 1053 aa15.58■□□□□ 0.09
RER1-207ENST00000488353 FLT1P17948 1338 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 KLRG2A4D1S0 409 aaPredicted RBP15.58■□□□□ 0.08
RER1-207ENST00000488353 APBA3O96018 575 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 RASA1P20936 1047 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 CCNE1P24864 410 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 P2RX5Q93086 422 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 KRT12Q99456 494 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 SLC24A3Q9HC58 644 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 BATF3Q9NR55 127 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 NAV1Q8NEY1 1877 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 ROBO3Q96MS0 1386 aa15.58■□□□□ 0.08
RER1-207ENST00000488353 RPSAP08865 295 aaKnown RBP15.57■□□□□ 0.08
RER1-207ENST00000488353 RHBDL3P58872 404 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 C11orf91Q3C1V1 193 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 NAIF1Q69YI7 327 aaPredicted RBP15.57■□□□□ 0.08
RER1-207ENST00000488353 USP17L2Q6R6M4 530 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 MTMR8Q96EF0 704 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 TRIM9Q9C026 710 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
RER1-207ENST00000488353 SMCO2A6NFE2 343 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 PAEPP09466 180 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 OR52Z1P0C646 297 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 ODF2Q5BJF6 829 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 ANKRD13CQ8N6S4 541 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 CCT6BQ92526 530 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 LRRC45Q96CN5 670 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 HVCN1Q96D96 273 aa15.57■□□□□ 0.08
RER1-207ENST00000488353 FRMD3A2A2Y4 597 aa15.56■□□□□ 0.08
RER1-207ENST00000488353 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
RER1-207ENST00000488353 HSD17B3P37058 310 aa15.56■□□□□ 0.08
RER1-207ENST00000488353 CDK8P49336 464 aa15.56■□□□□ 0.08
RER1-207ENST00000488353 PICALMQ13492 652 aa15.56■□□□□ 0.08
RER1-207ENST00000488353 DOK7Q18PE1 504 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms