RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 IGDCC4Q8TDY8 1250 aa6.37□□□□□ -1.39
CCDC66-221ENST00000487739 DVL3Q92997 716 aaPredicted RBP6.37□□□□□ -1.39
CCDC66-221ENST00000487739 TMPRSS5Q9H3S3 457 aa6.37□□□□□ -1.39
CCDC66-221ENST00000487739 DSEQ9UL01 958 aa6.37□□□□□ -1.39
CCDC66-221ENST00000487739 NKRFO15226 690 aaKnown RBP eCLIP6.36□□□□□ -1.39
CCDC66-221ENST00000487739 FBXO21O94952 628 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 LTFP02788 710 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 PPP2CBP62714 309 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 PPP2CAP67775 309 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 SKIDA1Q1XH10 827 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 KCTD1Q719H9 257 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 CIR1Q86X95 450 aaPredicted RBP6.36□□□□□ -1.39
CCDC66-221ENST00000487739 SPATA9Q9BWV2 254 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 JADE2Q9NQC1 790 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 IGSF5Q9NSI5 407 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 ST6GALNAC2Q9UJ37 374 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 ADAM29Q9UKF5 820 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 ZDHHC9Q9Y397 364 aa6.36□□□□□ -1.39
CCDC66-221ENST00000487739 CKMP06732 381 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 ENO2P09104 434 aaPredicted RBP6.35□□□□□ -1.39
CCDC66-221ENST00000487739 TNFRSF1AP19438 455 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 EPHA5P54756 1037 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 PHF19Q5T6S3 580 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 CD276Q5ZPR3 534 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 NUDT10Q8NFP7 164 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 NUDT11Q96G61 164 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 IPPKQ9H8X2 491 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 ARHGAP20Q9P2F6 1191 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 ZFP69BQ9UJL9 534 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 TELO2Q9Y4R8 837 aa6.35□□□□□ -1.39
CCDC66-221ENST00000487739 MATN3O15232 486 aa6.34□□□□□ -1.39
CCDC66-221ENST00000487739 B4GALT4O60513 344 aa6.34□□□□□ -1.39
CCDC66-221ENST00000487739 KLHL18O94889 574 aa6.34□□□□□ -1.39
CCDC66-221ENST00000487739 ZC3H6P61129 1189 aaKnown RBP6.34□□□□□ -1.39
CCDC66-221ENST00000487739 SLFN13Q68D06 897 aa6.34□□□□□ -1.39
CCDC66-221ENST00000487739 RALYLQ86SE5 291 aaKnown RBP6.34□□□□□ -1.39
CCDC66-221ENST00000487739 KISS1RQ969F8 398 aaPredicted RBP6.34□□□□□ -1.39
CCDC66-221ENST00000487739 MSRB2Q9Y3D2 182 aa6.34□□□□□ -1.39
CCDC66-221ENST00000487739 ASXL2Q76L83 1435 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 ZNF839A8K0R7 811 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 AQP7O14520 342 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 GPR42O15529 346 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 PDPK1O15530 556 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 KNG1P01042 644 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 GLRBP48167 497 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 PFKPQ01813 784 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 ICAM4Q14773 271 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 Q6ZUG5 572 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 SPATC1Q76KD6 591 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 MAMDC2Q7Z304 686 aaPredicted RBP6.33□□□□□ -1.4
CCDC66-221ENST00000487739 CDC6Q99741 560 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 KCND1Q9NSA2 647 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 TRAF6Q9Y4K3 522 aa6.33□□□□□ -1.4
CCDC66-221ENST00000487739 ZXDAP98168 799 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 PAK1Q13153 545 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 RASGRF1Q13972 1273 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 MTERF2Q49AM1 385 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 MTDHQ86UE4 582 aaKnown RBP6.32□□□□□ -1.4
CCDC66-221ENST00000487739 SCUBE1Q8IWY4 988 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 REXO1L1PQ8IX06 675 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 IFNL2Q8IZJ0 200 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 STPG3Q8N7X2 389 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 IPO9Q96P70 1041 aaKnown RBP6.32□□□□□ -1.4
CCDC66-221ENST00000487739 CDK5RAP1Q96SZ6 601 aaKnown RBP6.32□□□□□ -1.4
CCDC66-221ENST00000487739 CD244Q9BZW8 370 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 TSC22D4Q9Y3Q8 395 aa6.32□□□□□ -1.4
CCDC66-221ENST00000487739 TRBV23-1A0A0A0MS06 115 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 E9PSI1 815 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 H0Y858 1186 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 ADCY3O60266 1144 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 SUMO1P63165 101 aaKnown RBP6.31□□□□□ -1.4
CCDC66-221ENST00000487739 SSRP1Q08945 709 aaKnown RBP6.31□□□□□ -1.4
CCDC66-221ENST00000487739 NBPF6Q5VWK0 638 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 NLGN4XQ8N0W4 816 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 DNERQ8NFT8 737 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 PTPRN2Q92932 1015 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 AJUBAQ96IF1 538 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 NBPF4Q96M43 638 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 KLC2Q9H0B6 622 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 MEGF9Q9H1U4 602 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
CCDC66-221ENST00000487739 PPP1R1BQ9UD71 204 aaPredicted RBP6.31□□□□□ -1.4
CCDC66-221ENST00000487739 ACOT7O00154 380 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 NAT1P18440 290 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 NAALADL2Q58DX5 795 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 SH3RF2Q8TEC5 729 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 PTPN18Q99952 460 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 TACO1Q9BSH4 297 aaKnown RBP6.3□□□□□ -1.4
CCDC66-221ENST00000487739 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 DEF6Q9H4E7 631 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 SEC61A2Q9H9S3 476 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 PFDN2Q9UHV9 154 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 SRPK3Q9UPE1 567 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 TCAF1Q9Y4C2 921 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 SLC4A7Q9Y6M7 1214 aa6.3□□□□□ -1.4
CCDC66-221ENST00000487739 CCDC85CA6NKD9 419 aa6.29□□□□□ -1.4
CCDC66-221ENST00000487739 PATE3B3GLJ2 98 aa6.29□□□□□ -1.4
CCDC66-221ENST00000487739 WNT9AO14904 365 aa6.29□□□□□ -1.4
CCDC66-221ENST00000487739 CNOT4O95628 575 aaKnown RBP6.29□□□□□ -1.4
CCDC66-221ENST00000487739 IL18BPO95998 194 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms