RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 TRIM27P14373 513 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 SLC1A4P43007 532 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 LPIN1Q14693 890 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 BRDTQ58F21 947 aaPredicted RBP6.95□□□□□ -1.3
COL4A3-206ENST00000487633 PLPP4Q5VZY2 271 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 TMEM184AQ6ZMB5 413 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 RUFY4Q6ZNE9 571 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 RNF207Q6ZRF8 634 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 DHX37Q8IY37 1157 aaKnown RBP6.95□□□□□ -1.3
COL4A3-206ENST00000487633 SIX5Q8N196 739 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 RSAD2Q8WXG1 361 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 ATP6V0A1Q93050 837 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 NEK1Q96PY6 1258 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 PLVAPQ9BX97 442 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 API5Q9BZZ5 524 aaKnown RBP6.95□□□□□ -1.3
COL4A3-206ENST00000487633 EHMT1Q9H9B1 1298 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 MKNK2Q9HBH9 465 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 SETD4Q9NVD3 440 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 ADD3Q9UEY8 706 aaKnown RBP6.95□□□□□ -1.3
COL4A3-206ENST00000487633 FRMPD2Q68DX3 1309 aaPredicted RBP6.95□□□□□ -1.3
COL4A3-206ENST00000487633 RAD50Q92878 1312 aa6.95□□□□□ -1.3
COL4A3-206ENST00000487633 SMIM10L2AP0DMW4 78 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 SMIM10L2BP0DMW5 78 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 HOXD8P13378 290 aaPredicted RBP6.94□□□□□ -1.3
COL4A3-206ENST00000487633 IBSPP21815 317 aaPredicted RBP6.94□□□□□ -1.3
COL4A3-206ENST00000487633 MGAT3Q09327 533 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 DGKDQ16760 1214 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 SBK1Q52WX2 424 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 PPM1JQ5JR12 505 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 KIAA0319Q5VV43 1072 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 RCSD1Q6JBY9 416 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 FAM160B2Q86V87 743 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 FAM9BQ8IZU0 186 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 NEDD1Q8NHV4 660 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 MICAL1Q8TDZ2 1067 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 GMCL1Q96IK5 515 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 STRBPQ96SI9 672 aaKnown RBP6.94□□□□□ -1.3
COL4A3-206ENST00000487633 BOLA2Q9H3K6 86 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 GCN1Q92616 2671 aaKnown RBP6.94□□□□□ -1.3
COL4A3-206ENST00000487633 NBEAQ8NFP9 2946 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 LAMA4Q16363 1823 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 CNOT1A5YKK6 2376 aaKnown RBP6.94□□□□□ -1.3
COL4A3-206ENST00000487633 PLIN4Q96Q06 1357 aa6.94□□□□□ -1.3
COL4A3-206ENST00000487633 C17orf102A2RUQ5 167 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 C1QTNF9BB2RNN3 333 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 PLA2G6O60733 806 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 N4BP1O75113 896 aaKnown RBP6.93□□□□□ -1.3
COL4A3-206ENST00000487633 CFHP08603 1231 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 C1QTNF9P0C862 333 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 FDX1P10109 184 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 PBX3P40426 434 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 ADAM17P78536 824 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 TFAP4Q01664 338 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 FAM26DQ5JW98 314 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 VARS2Q5ST30 1063 aaKnown RBP6.93□□□□□ -1.3
COL4A3-206ENST00000487633 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 TRIM50Q86XT4 487 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 TRMT2AQ8IZ69 625 aaKnown RBP6.93□□□□□ -1.3
COL4A3-206ENST00000487633 TMEM57Q8N5G2 664 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 CHURC1Q8WUH1 139 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 OSBP2Q969R2 916 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 GPCPD1Q9NPB8 672 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 ARPP21Q9UBL0 812 aaPredicted RBP6.93□□□□□ -1.3
COL4A3-206ENST00000487633 RWDD3Q9Y3V2 267 aa6.93□□□□□ -1.3
COL4A3-206ENST00000487633 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.93□□□□□ -1.3
COL4A3-206ENST00000487633 MYH15Q9Y2K3 1946 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 M0R2C6 588 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 GDF9O60383 454 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 FGF18O76093 207 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 CD52P31358 61 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 RARSP54136 660 aaKnown RBP6.92□□□□□ -1.3
COL4A3-206ENST00000487633 TTF1Q15361 905 aaPredicted RBP6.92□□□□□ -1.3
COL4A3-206ENST00000487633 USH1GQ495M9 461 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 RARS2Q5T160 578 aaKnown RBP6.92□□□□□ -1.3
COL4A3-206ENST00000487633 FAM102BQ5T8I3 360 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 ZNF444Q8N0Y2 327 aaPredicted RBP6.92□□□□□ -1.3
COL4A3-206ENST00000487633 IL31RAQ8NI17 732 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 PPTC7Q8NI37 304 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 SYTL5Q8TDW5 730 aaPredicted RBP6.92□□□□□ -1.3
COL4A3-206ENST00000487633 EMID1Q96A84 441 aaPredicted RBP6.92□□□□□ -1.3
COL4A3-206ENST00000487633 FOXQ1Q9C009 403 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 TMX1Q9H3N1 280 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 PAG1Q9NWQ8 432 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 CA14Q9ULX7 337 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 HDAC5Q9UQL6 1122 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 HCFC2Q9Y5Z7 792 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 AKAP13Q12802 2813 aa6.92□□□□□ -1.3
COL4A3-206ENST00000487633 IGF2RP11717 2491 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 BPTFQ12830 3046 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 LOC102724159A0A0B4J2E5 919 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 FOXP2O15409 715 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 MGEA5O60502 916 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 LGALS2P05162 132 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 TSPY3P0CV98 308 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 TSPY8P0CW00 308 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 EIF2AK2P19525 551 aaKnown RBP6.91□□□□□ -1.3
COL4A3-206ENST00000487633 PMLP29590 882 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 PWP2Q15269 919 aaKnown RBP6.91□□□□□ -1.3
COL4A3-206ENST00000487633 CCDC96Q2M329 555 aa6.91□□□□□ -1.3
COL4A3-206ENST00000487633 FBXO47Q5MNV8 452 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms