RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 TICAM2Q86XR7 235 aa17.34■□□□□ 0.37
PFDN4-204ENST00000487129 CRIPAKQ8N1N5 446 aa17.34■□□□□ 0.37
PFDN4-204ENST00000487129 LMBR1Q8WVP7 490 aa17.34■□□□□ 0.37
PFDN4-204ENST00000487129 ZSCAN10Q96SZ4 725 aaPredicted RBP17.34■□□□□ 0.37
PFDN4-204ENST00000487129 MLXIPQ9HAP2 919 aa17.34■□□□□ 0.37
PFDN4-204ENST00000487129 MAP3K20Q9NYL2 800 aaKnown RBP17.34■□□□□ 0.37
PFDN4-204ENST00000487129 FRMPD4Q14CM0 1322 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 LOC730098B7Z3J9 87 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 ST18O60284 1047 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.36
PFDN4-204ENST00000487129 GHRP10912 638 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 MRPS9P82933 396 aaKnown RBP17.33■□□□□ 0.36
PFDN4-204ENST00000487129 MGAT3Q09327 533 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 CBX2Q14781 532 aaPredicted RBP17.33■□□□□ 0.36
PFDN4-204ENST00000487129 POTEHQ6S545 545 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 ADGRD2Q7Z7M1 963 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 IQCA1Q86XH1 822 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 SMRP1Q8NCR6 262 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 LINC01599Q8WXQ3 324 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 INPP4AQ96PE3 977 aaPredicted RBP17.33■□□□□ 0.36
PFDN4-204ENST00000487129 GPR20Q99678 358 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 IGFLR1Q9H665 355 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 PLAGL2Q9UPG8 496 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 RWDD3Q9Y3V2 267 aa17.33■□□□□ 0.36
PFDN4-204ENST00000487129 TTC3P53804 2025 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 B4E1Z4 1266 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 DHX16O60231 1041 aaKnown RBP17.32■□□□□ 0.36
PFDN4-204ENST00000487129 CSPG5O95196 566 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 GLP2RO95838 553 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 ICAM3P32942 547 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 NT5C2P49902 561 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 ZXDAP98168 799 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 LPIN1Q14693 890 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 METTL7BQ6UX53 244 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 RUFY4Q6ZNE9 571 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 SAMD3Q8N6K7 520 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 PBXIP1Q96AQ6 731 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 PLVAPQ9BX97 442 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 USP26Q9BXU7 913 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 ZSWIM5Q9P217 1185 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 PCDHA1Q9Y5I3 950 aa17.32■□□□□ 0.36
PFDN4-204ENST00000487129 ENPP3O14638 875 aa17.31■□□□□ 0.36
PFDN4-204ENST00000487129 ZBTB5O15062 677 aa17.31■□□□□ 0.36
PFDN4-204ENST00000487129 DGKIO75912 1065 aa17.31■□□□□ 0.36
PFDN4-204ENST00000487129 CCND2P30279 289 aa17.31■□□□□ 0.36
PFDN4-204ENST00000487129 COASYQ13057 564 aa17.31■□□□□ 0.36
PFDN4-204ENST00000487129 CCDC178Q5BJE1 867 aa17.31■□□□□ 0.36
PFDN4-204ENST00000487129 ZFHX2Q9C0A1 2572 aaPredicted RBP17.31■□□□□ 0.36
PFDN4-204ENST00000487129 SPATA31C2B4DYI2 1134 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 ZNF213O14771 459 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 ITGB1P05556 798 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 GNAT1P11488 350 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 RRP1P56182 461 aaKnown RBP17.3■□□□□ 0.36
PFDN4-204ENST00000487129 ARHGAP4P98171 946 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 BTG3Q14201 252 aaPredicted RBP17.3■□□□□ 0.36
PFDN4-204ENST00000487129 CYFIP1Q7L576 1253 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 FBXL6Q8N531 539 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 EFHBQ8N7U6 833 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 SPPL3Q8TCT6 385 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 P2RX5Q93086 422 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 ASIC4Q96FT7 647 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 MAD2L2Q9UI95 211 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 MRPL42Q9Y6G3 142 aaKnown RBP17.3■□□□□ 0.36
PFDN4-204ENST00000487129 DOCK5Q9H7D0 1870 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 KIAA1671Q9BY89 1806 aa17.3■□□□□ 0.36
PFDN4-204ENST00000487129 MYO15AQ9UKN7 3530 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 PALM3A6NDB9 673 aaPredicted RBP17.29■□□□□ 0.36
PFDN4-204ENST00000487129 TRIM6-TRIM34B2RNG4 842 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 KLRF2D3W0D1 207 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 NOP56O00567 594 aaKnown RBP17.29■□□□□ 0.36
PFDN4-204ENST00000487129 NDUFV1P49821 464 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 VCPP55072 806 aaKnown RBP17.29■□□□□ 0.36
PFDN4-204ENST00000487129 SEC23AQ15436 765 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 PKN1Q16512 942 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 ANKRD45Q5TZF3 282 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 FCHSD1Q86WN1 690 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 PRRX2Q99811 253 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 FAM86C1Q9NVL1 165 aa17.29■□□□□ 0.36
PFDN4-204ENST00000487129 NRCAMQ92823 1304 aa17.28■□□□□ 0.36
PFDN4-204ENST00000487129 GCOM1H8Y6P7 765 aaPredicted RBP17.28■□□□□ 0.36
PFDN4-204ENST00000487129 POLR2MP0CAP2 368 aa17.28■□□□□ 0.36
PFDN4-204ENST00000487129 FBXO47Q5MNV8 452 aa17.28■□□□□ 0.36
PFDN4-204ENST00000487129 RTN4RL1Q86UN2 441 aaPredicted RBP17.28■□□□□ 0.36
PFDN4-204ENST00000487129 AGO3Q9H9G7 860 aaKnown RBP17.28■□□□□ 0.36
PFDN4-204ENST00000487129 BARX2Q9UMQ3 279 aaPredicted RBP17.28■□□□□ 0.36
PFDN4-204ENST00000487129 USP15Q9Y4E8 981 aaPredicted RBP17.28■□□□□ 0.36
PFDN4-204ENST00000487129 PCDHGC5Q9Y5F6 944 aa17.28■□□□□ 0.36
PFDN4-204ENST00000487129 MBLAC1A4D2B0 266 aaPredicted RBP17.27■□□□□ 0.36
PFDN4-204ENST00000487129 CYTH3O43739 400 aa17.27■□□□□ 0.36
PFDN4-204ENST00000487129 NEDD9Q14511 834 aa17.27■□□□□ 0.36
PFDN4-204ENST00000487129 MARCH8Q5T0T0 291 aa17.27■□□□□ 0.36
PFDN4-204ENST00000487129 TAF2Q6P1X5 1199 aa17.27■□□□□ 0.36
PFDN4-204ENST00000487129 RIOX1Q9H6W3 641 aa17.27■□□□□ 0.36
PFDN4-204ENST00000487129 FIBPO43427 364 aa17.26■□□□□ 0.35
PFDN4-204ENST00000487129 GFRA3O60609 400 aa17.26■□□□□ 0.35
PFDN4-204ENST00000487129 SDSP20132 328 aa17.26■□□□□ 0.35
PFDN4-204ENST00000487129 NRIP1P48552 1158 aa17.26■□□□□ 0.35
PFDN4-204ENST00000487129 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
PFDN4-204ENST00000487129 SIGLEC14Q08ET2 396 aa17.26■□□□□ 0.35
PFDN4-204ENST00000487129 GNPTABQ3T906 1256 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms