RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 VAV3Q9UKW4 847 aa7.87□□□□□ -1.15
SF3A3-206ENST00000487062 KIAA1024Q9UPX6 916 aa7.87□□□□□ -1.15
SF3A3-206ENST00000487062 TRPC6Q9Y210 931 aa7.87□□□□□ -1.15
SF3A3-206ENST00000487062 BICDL2A1A5D9 508 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 MYMKA6NI61 221 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 E9PMD0 336 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 PSMA7O14818 248 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 MED24O75448 989 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 SERPINC1P01008 464 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 SSBP05455 408 aaKnown RBP eCLIP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 KRT18P05783 430 aaKnown RBP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 NR3C2P08235 984 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 PLA2G4BP0C869 781 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 POTEIP0CG38 1075 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 POTEJP0CG39 1038 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 CETPP11597 493 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 ITGB5P18084 799 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 GTF2A2P52657 109 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 MRPS9P82933 396 aaKnown RBP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 FANCCQ00597 558 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 PAK1Q13153 545 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 MTMR1Q13613 665 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 COBLL1Q53SF7 1204 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 KLHL10Q6JEL2 608 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 MIER3Q7Z3K6 550 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 CATSPER3Q86XQ3 398 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 CCDC65Q8IXS2 484 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 ANKRD35Q8N283 1001 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 GIMAP8Q8ND71 665 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 ANKRD20A12PQ8NF67 263 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 DNERQ8NFT8 737 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 LRRC15Q8TF66 581 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 GPRASP2Q96D09 838 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 DHTKD1Q96HY7 919 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 PCMTD1Q96MG8 357 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 PHF12Q96QT6 1004 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 UIMC1Q96RL1 719 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 IWS1Q96ST2 819 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 MPHOSPH6Q99547 160 aaKnown RBP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 PAGR1Q9BTK6 254 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 SPATC1LQ9H0A9 340 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 A1CFQ9NQ94 594 aaKnown RBP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 KCNH7Q9NS40 1196 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 FANCLQ9NW38 375 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 CYP39A1Q9NYL5 469 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 RWDD2AQ9UIY3 292 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 CTNND2Q9UQB3 1225 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 NFE2L3Q9Y4A8 694 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 LCTP09848 1927 aa7.86□□□□□ -1.15
SF3A3-206ENST00000487062 ZNFX1Q9P2E3 1918 aaKnown RBP7.86□□□□□ -1.15
SF3A3-206ENST00000487062 POTEFA5A3E0 1075 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 GRXCR2A6NFK2 248 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 TRAF5O00463 557 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 CHMP2AO43633 222 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 KIF20AO95235 890 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 CELF2O95319 508 aaKnown RBP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 EYA4O95677 639 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 SPATA31C1P0DKV0 1188 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 IDEP14735 1019 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 CD44P16070 742 aaKnown RBP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 MSNP26038 577 aaKnown RBP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 SFNP31947 248 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 PRCPP42785 496 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 FMR1Q06787 632 aaKnown RBP eCLIP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 SPAG1Q07617 926 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 STXBP2Q15833 593 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 ECM1Q16610 540 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 GNPTABQ3T906 1256 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 POTEGQ6S5H5 508 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 POTEEQ6S8J3 1075 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 DYMQ7RTS9 669 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 KCNK18Q7Z418 384 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 VSIG10LQ86VR7 867 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 GPBP1Q86WP2 473 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 NCAPG2Q86XI2 1143 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 TPH2Q8IWU9 490 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 SMYD4Q8IYR2 804 aaPredicted RBP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 ADSSL1Q8N142 457 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 SYT2Q8N9I0 419 aaPredicted RBP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 SPC24Q8NBT2 197 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 IL31RAQ8NI17 732 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 NOC3LQ8WTT2 800 aaKnown RBP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 NELFBQ8WX92 580 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 DDX12PQ92771 950 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 DYDC2Q96IM9 177 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 NACC1Q96RE7 527 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 CTAGE1Q96RT6 745 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 UNC45AQ9H3U1 944 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 AGO4Q9HCK5 861 aaKnown RBP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 IFNKQ9P0W0 207 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 BTBD7Q9P203 1132 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 ADD3Q9UEY8 706 aaKnown RBP7.85□□□□□ -1.15
SF3A3-206ENST00000487062 GDAQ9Y2T3 454 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 SLC45A1Q9Y2W3 748 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 WDR81Q562E7 1941 aa7.85□□□□□ -1.15
SF3A3-206ENST00000487062 MYH11P35749 1972 aa7.84□□□□□ -1.15
SF3A3-206ENST00000487062 CCL15-CCL14A0A0B4J2E2 113 aa7.84□□□□□ -1.15
SF3A3-206ENST00000487062 POTEB2H3BUK9 544 aa7.84□□□□□ -1.15
SF3A3-206ENST00000487062 DDX39AO00148 427 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms