RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 ICA1Q05084 483 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 ITIH3Q06033 890 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 ADAM9Q13443 819 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 MAP9Q49MG5 647 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 Q4G0T1 1027 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 DACT2Q5SW24 774 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 SFMBT2Q5VUG0 894 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 IQCEQ6IPM2 695 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 KRT27Q7Z3Y8 459 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 CCDC102AQ96A19 550 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 ALS2CR12Q96Q35 445 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 AMNQ9BXJ7 453 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 NUCKS1Q9H1E3 243 aaKnown RBP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 TMX4Q9H1E5 349 aaPredicted RBP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 NRXN2Q9P2S2 1712 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 FAM86B1E9PN63 330 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 SERPING1P05155 500 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 FAM86B2P0C5J1 330 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 CASP5P51878 434 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 RBM5P52756 815 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 GIT2Q14161 759 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 SLC9C1Q4G0N8 1177 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 HAUS3Q68CZ6 603 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 FAM71BQ8TC56 605 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 CALCOCO1Q9P1Z2 691 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 TBX3O15119 743 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 GDF11O95390 407 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 KRT18P05783 430 aaKnown RBP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 TCP1P17987 556 aaKnown RBP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 AARSP49588 968 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 HDLBPQ00341 1268 aaKnown RBP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 EDRF1Q3B7T1 1238 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 TDRD12Q587J7 1177 aaKnown RBP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 RNF10Q8N5U6 811 aaKnown RBP13.6□□□□□ -0.23
PTCD2-204ENST00000486995 GMCL1P1Q8NEA9 526 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 SPATA4Q8NEY3 305 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 TLR10Q9BXR5 811 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 MED4Q9NPJ6 270 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 FAM184BQ9ULE4 1060 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 HPCAL4Q9UM19 191 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 HYOU1Q9Y4L1 999 aa13.6□□□□□ -0.23
PTCD2-204ENST00000486995 ZC3H4Q9UPT8 1303 aaKnown RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 MEIS1O00470 390 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 NCK2O43639 380 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 SYF2O95926 243 aaKnown RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 NDUFB10O96000 172 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 MMP10P09238 476 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 RPA1P27694 616 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 CXCR5P32302 372 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 LMAN1P49257 510 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 MMP14P50281 582 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 FKBP1AP62942 108 aaKnown RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 JAG1P78504 1218 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 HSP90B2PQ58FF3 399 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 KLHDC7AQ5VTJ3 777 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 GMCL1Q96IK5 515 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 ACBD3Q9H3P7 528 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 ZHX3Q9H4I2 956 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 BUB1O43683 1085 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 PHACTR2O75167 634 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 SREBF1P36956 1147 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 TNNT3P45378 269 aaPredicted RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 EZH2Q15910 746 aaKnown RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 USH1GQ495M9 461 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 FBXO11Q86XK2 927 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 GSPT2Q8IYD1 628 aaKnown RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 SYT2Q8N9I0 419 aaPredicted RBP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 HDAC7Q8WUI4 952 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
PTCD2-204ENST00000486995 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 GDAP1L1Q96MZ0 367 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 NOX5Q96PH1 765 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 PSMB7Q99436 277 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 LRRC1Q9BTT6 524 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 TRIM34Q9BYJ4 488 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 DNM3Q9UQ16 869 aa13.59□□□□□ -0.23
PTCD2-204ENST00000486995 OPLAHO14841 1288 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 CETN3O15182 167 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 HOXD13P35453 343 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 KCNH2Q12809 1159 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 ABCB5Q2M3G0 1257 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 MCTP2Q6DN12 878 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 ERMNQ8TAM6 284 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 REEP2Q9BRK0 252 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 GANQ9H2C0 597 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 SMARCAL1Q9NZC9 954 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 AIPL1Q9NZN9 384 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 TRAF3IP3Q9Y228 551 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 FOSP01100 380 aaPredicted RBP13.58□□□□□ -0.24
PTCD2-204ENST00000486995 NR2F2P24468 414 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 CIITAP33076 1130 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 SYDE2Q5VT97 1194 aa13.58□□□□□ -0.24
PTCD2-204ENST00000486995 DPY19L2P1Q6NXN4 242 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms