RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 PPP2R2DQ66LE6 453 aa25.09■■□□□ 1.61
HLA-F-228ENST00000486194 SDF4Q9BRK5 362 aa25.09■■□□□ 1.61
HLA-F-228ENST00000486194 RNF26Q9BY78 433 aaPredicted RBP25.09■■□□□ 1.61
HLA-F-228ENST00000486194 ZMYND12Q9H0C1 365 aa25.09■■□□□ 1.61
HLA-F-228ENST00000486194 JPH1Q9HDC5 661 aaPredicted RBP25.09■■□□□ 1.61
HLA-F-228ENST00000486194 ERAP1Q9NZ08 941 aa25.09■■□□□ 1.61
HLA-F-228ENST00000486194 PKD2L1Q9P0L9 805 aa25.09■■□□□ 1.61
HLA-F-228ENST00000486194 ABHD14A-ACY1A0A1B0GW23 586 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 RSPH10B2B2RC85 870 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 TREHO43280 583 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 RSPH10BP0C881 870 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 ZNF76P36508 570 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 GLG1Q92896 1179 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 WNT8BQ93098 351 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 PGBD1Q96JS3 809 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 SMARCAD1Q9H4L7 1026 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 SETD4Q9NVD3 440 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 SLC9A2Q9UBY0 812 aa25.08■■□□□ 1.61
HLA-F-228ENST00000486194 NFASCO94856 1347 aa25.08■■□□□ 1.6
HLA-F-228ENST00000486194 GSTTP1A0A1W2PQM5 241 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 IFNAR1P17181 557 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 PDIA3P30101 505 aaKnown RBP25.07■■□□□ 1.6
HLA-F-228ENST00000486194 IKBKEQ14164 716 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 TRAF7Q6Q0C0 670 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 NIPA1Q7RTP0 329 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 HERC6Q8IVU3 1022 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 CCDC148Q8NFR7 591 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 BICD2Q8TD16 824 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 TNPO1Q92973 898 aaKnown RBP25.07■■□□□ 1.6
HLA-F-228ENST00000486194 PRDM12Q9H4Q4 367 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 TMEM260Q9NX78 707 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 TELO2Q9Y4R8 837 aa25.07■■□□□ 1.6
HLA-F-228ENST00000486194 TRIP12Q14669 1992 aaPredicted RBP25.06■■□□□ 1.6
HLA-F-228ENST00000486194 LGR5O75473 907 aa25.06■■□□□ 1.6
HLA-F-228ENST00000486194 WDR5P61964 334 aaKnown RBP25.06■■□□□ 1.6
HLA-F-228ENST00000486194 ARHGAP4P98171 946 aa25.06■■□□□ 1.6
HLA-F-228ENST00000486194 PKN1Q16512 942 aa25.06■■□□□ 1.6
HLA-F-228ENST00000486194 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.06■■□□□ 1.6
HLA-F-228ENST00000486194 REXO1Q8N1G1 1221 aaKnown RBP25.06■■□□□ 1.6
HLA-F-228ENST00000486194 AZI2Q9H6S1 392 aa25.06■■□□□ 1.6
HLA-F-228ENST00000486194 COL6A3P12111 3177 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 MEIS1O00470 390 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 CENPBP07199 599 aaPredicted RBP25.05■■□□□ 1.6
HLA-F-228ENST00000486194 NTRK3Q16288 839 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 JAKMIP3Q5VZ66 844 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 TRIM22Q8IYM9 498 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 CYP2W1Q8TAV3 490 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 LMBR1Q8WVP7 490 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 PHKBQ93100 1093 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 SLC26A6Q9BXS9 759 aa25.05■■□□□ 1.6
HLA-F-228ENST00000486194 DOCK5Q9H7D0 1870 aa25.04■■□□□ 1.6
HLA-F-228ENST00000486194 MYOGP15173 224 aa25.04■■□□□ 1.6
HLA-F-228ENST00000486194 CCT2P78371 535 aaKnown RBP25.04■■□□□ 1.6
HLA-F-228ENST00000486194 ADAM17P78536 824 aa25.04■■□□□ 1.6
HLA-F-228ENST00000486194 PPFIA1Q13136 1202 aa25.04■■□□□ 1.6
HLA-F-228ENST00000486194 TOB2Q14106 344 aaPredicted RBP25.04■■□□□ 1.6
HLA-F-228ENST00000486194 TAF2Q6P1X5 1199 aa25.04■■□□□ 1.6
HLA-F-228ENST00000486194 ZNF274Q96GC6 653 aaPredicted RBP25.04■■□□□ 1.6
HLA-F-228ENST00000486194 AGO4Q9HCK5 861 aaKnown RBP25.04■■□□□ 1.6
HLA-F-228ENST00000486194 CPLX1O14810 134 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 TLL1O43897 1013 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 EIF5BO60841 1220 aaKnown RBP25.03■■□□□ 1.6
HLA-F-228ENST00000486194 CA3P07451 260 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 CYP3A4P08684 503 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 ARP10275 920 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 MBTPS1Q14703 1052 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 CPLX2Q6PUV4 134 aaKnown RBP25.03■■□□□ 1.6
HLA-F-228ENST00000486194 RSPH3Q86UC2 560 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 ZBED2Q9BTP6 218 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 SH3GLB2Q9NR46 395 aa25.03■■□□□ 1.6
HLA-F-228ENST00000486194 RPLP2P05387 115 aaKnown RBP25.02■■□□□ 1.6
HLA-F-228ENST00000486194 MARK3P27448 753 aa25.02■■□□□ 1.6
HLA-F-228ENST00000486194 ACTR2P61160 394 aa25.02■■□□□ 1.6
HLA-F-228ENST00000486194 PLA2G4DQ86XP0 818 aa25.02■■□□□ 1.6
HLA-F-228ENST00000486194 UPF3BQ9BZI7 483 aaKnown RBP25.02■■□□□ 1.6
HLA-F-228ENST00000486194 NCOA5Q9HCD5 579 aaKnown RBP25.02■■□□□ 1.6
HLA-F-228ENST00000486194 PDRG1Q9NUG6 133 aa25.02■■□□□ 1.6
HLA-F-228ENST00000486194 RRN3P2A6NIE6 340 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 SETQ01105 290 aaPredicted RBP25.01■■□□□ 1.59
HLA-F-228ENST00000486194 SSRP1Q08945 709 aaKnown RBP25.01■■□□□ 1.59
HLA-F-228ENST00000486194 GRIK4Q16099 956 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 PLEKHG4Q58EX7 1191 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 PLPPR4Q7Z2D5 763 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 RPAINQ86UA6 219 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 DBF4BQ8NFT6 615 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 CRYGNQ8WXF5 182 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 SEPT8Q92599 483 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 TUBE1Q9UJT0 475 aa25.01■■□□□ 1.59
HLA-F-228ENST00000486194 GBF1Q92538 1859 aa25■■□□□ 1.59
HLA-F-228ENST00000486194 TET1Q8NFU7 2136 aa25■■□□□ 1.59
HLA-F-228ENST00000486194 CTSHP09668 335 aa25■■□□□ 1.59
HLA-F-228ENST00000486194 SLC26A2P50443 739 aa25■■□□□ 1.59
HLA-F-228ENST00000486194 ITGB3BPQ13352 177 aaPredicted RBP25■■□□□ 1.59
HLA-F-228ENST00000486194 FAM26DQ5JW98 314 aa25■■□□□ 1.59
HLA-F-228ENST00000486194 MBLAC1A4D2B0 266 aaPredicted RBP24.99■■□□□ 1.59
HLA-F-228ENST00000486194 FAM86B1E9PN63 330 aa24.99■■□□□ 1.59
HLA-F-228ENST00000486194 FAM86B2P0C5J1 330 aa24.99■■□□□ 1.59
HLA-F-228ENST00000486194 IGFBP4P22692 258 aa24.99■■□□□ 1.59
HLA-F-228ENST00000486194 STAT5BP51692 787 aa24.99■■□□□ 1.59
HLA-F-228ENST00000486194 DEFB103AP81534 67 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms