RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 DSCC1Q9BVC3 393 aa22.36■■□□□ 1.17
CHRD-216ENST00000486066 KMT2EQ8IZD2 1858 aa22.36■■□□□ 1.17
CHRD-216ENST00000486066 CYTH3O43739 400 aa22.35■■□□□ 1.17
CHRD-216ENST00000486066 CTNNB1P35222 781 aa22.35■■□□□ 1.17
CHRD-216ENST00000486066 TRIM50Q86XT4 487 aa22.35■■□□□ 1.17
CHRD-216ENST00000486066 MSLNLQ96KJ4 702 aa22.35■■□□□ 1.17
CHRD-216ENST00000486066 C11orf84Q9BUA3 381 aaPredicted RBP22.35■■□□□ 1.17
CHRD-216ENST00000486066 UPF3BQ9BZI7 483 aaKnown RBP22.35■■□□□ 1.17
CHRD-216ENST00000486066 OSBPL3Q9H4L5 887 aa22.35■■□□□ 1.17
CHRD-216ENST00000486066 MUTYHQ9UIF7 546 aa22.35■■□□□ 1.17
CHRD-216ENST00000486066 TRIM6-TRIM34B2RNG4 842 aa22.34■■□□□ 1.17
CHRD-216ENST00000486066 GCOM1H8Y6P7 765 aaPredicted RBP22.34■■□□□ 1.17
CHRD-216ENST00000486066 MMP1P03956 469 aa22.34■■□□□ 1.17
CHRD-216ENST00000486066 POLR2MP0CAP2 368 aa22.34■■□□□ 1.17
CHRD-216ENST00000486066 GNAT1P11488 350 aa22.34■■□□□ 1.17
CHRD-216ENST00000486066 GTF2F1P35269 517 aaKnown RBP eCLIP22.34■■□□□ 1.17
CHRD-216ENST00000486066 SMAD4Q13485 552 aaKnown RBP22.34■■□□□ 1.17
CHRD-216ENST00000486066 BMP8AQ7Z5Y6 402 aa22.34■■□□□ 1.17
CHRD-216ENST00000486066 RNF135Q8IUD6 432 aa22.34■■□□□ 1.17
CHRD-216ENST00000486066 POP1Q99575 1024 aaKnown RBP22.34■■□□□ 1.17
CHRD-216ENST00000486066 RWDD3Q9Y3V2 267 aa22.34■■□□□ 1.17
CHRD-216ENST00000486066 STAM2O75886 525 aa22.33■■□□□ 1.17
CHRD-216ENST00000486066 EYA4O95677 639 aa22.33■■□□□ 1.17
CHRD-216ENST00000486066 ADAM15Q13444 863 aa22.33■■□□□ 1.17
CHRD-216ENST00000486066 NEDD9Q14511 834 aa22.33■■□□□ 1.17
CHRD-216ENST00000486066 IFIT1BQ5T764 474 aaKnown RBP22.33■■□□□ 1.17
CHRD-216ENST00000486066 CYFIP1Q7L576 1253 aa22.33■■□□□ 1.17
CHRD-216ENST00000486066 RILPL2Q969X0 211 aa22.33■■□□□ 1.17
CHRD-216ENST00000486066 KRT23Q9C075 422 aa22.33■■□□□ 1.17
CHRD-216ENST00000486066 SUPT16HQ9Y5B9 1047 aaKnown RBP22.33■■□□□ 1.17
CHRD-216ENST00000486066 LINC01565O15544 149 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 LPIN1Q14693 890 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 EP400NLQ6ZTU2 488 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 PRSS33Q8NF86 280 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 EDAQ92838 391 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 MFSD14AQ96MC6 490 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 PIGSQ96S52 555 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 PHOX2BQ99453 314 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 SENP7Q9BQF6 1050 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 LNPKQ9C0E8 428 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 ALG13Q9NP73 1137 aaKnown RBP22.32■■□□□ 1.16
CHRD-216ENST00000486066 ZBTB47Q9UFB7 747 aaPredicted RBP22.32■■□□□ 1.16
CHRD-216ENST00000486066 VPS13AQ96RL7 3174 aa22.32■■□□□ 1.16
CHRD-216ENST00000486066 NRCAMQ92823 1304 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 NOP56O00567 594 aaKnown RBP22.31■■□□□ 1.16
CHRD-216ENST00000486066 ENPP3O14638 875 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 GRM4Q14833 912 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 CLUL1Q15846 466 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 GNPTABQ3T906 1256 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 CWC27Q6UX04 472 aaKnown RBP22.31■■□□□ 1.16
CHRD-216ENST00000486066 RUFY4Q6ZNE9 571 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 CYB5R4Q7L1T6 521 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 FCHSD1Q86WN1 690 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 SMC5Q8IY18 1101 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 LINC01599Q8WXQ3 324 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 UBAC1Q9BSL1 405 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 PLVAPQ9BX97 442 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 IL25Q9H293 177 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 CNNM2Q9H8M5 875 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 LOXHD1Q8IVV2 1947 aa22.31■■□□□ 1.16
CHRD-216ENST00000486066 FIBPO43427 364 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 DGKIO75912 1065 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 DNAJB1P25685 340 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 ARHGAP4P98171 946 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 IMMTQ16891 758 aaKnown RBP22.3■■□□□ 1.16
CHRD-216ENST00000486066 PLEKHM2Q8IWE5 1019 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 P2RX5Q93086 422 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 CLEC1BQ9P126 229 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 CD207Q9UJ71 328 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 ZNF215Q9UL58 517 aaPredicted RBP22.3■■□□□ 1.16
CHRD-216ENST00000486066 PLAGL2Q9UPG8 496 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 PLXNA4Q9HCM2 1894 aa22.3■■□□□ 1.16
CHRD-216ENST00000486066 MBLAC1A4D2B0 266 aaPredicted RBP22.29■■□□□ 1.16
CHRD-216ENST00000486066 GHRP10912 638 aa22.29■■□□□ 1.16
CHRD-216ENST00000486066 CBX2Q14781 532 aaPredicted RBP22.29■■□□□ 1.16
CHRD-216ENST00000486066 FBXO47Q5MNV8 452 aa22.29■■□□□ 1.16
CHRD-216ENST00000486066 TAF2Q6P1X5 1199 aa22.29■■□□□ 1.16
CHRD-216ENST00000486066 HOMER1Q86YM7 354 aa22.29■■□□□ 1.16
CHRD-216ENST00000486066 PNMA6FA0A0J9YX94 578 aa22.28■■□□□ 1.16
CHRD-216ENST00000486066 LOC730098B7Z3J9 87 aa22.28■■□□□ 1.16
CHRD-216ENST00000486066 RRP1P56182 461 aaKnown RBP22.28■■□□□ 1.16
CHRD-216ENST00000486066 TROAPQ12815 778 aa22.28■■□□□ 1.16
CHRD-216ENST00000486066 TRAF1Q13077 416 aa22.28■■□□□ 1.16
CHRD-216ENST00000486066 MARCH8Q5T0T0 291 aa22.28■■□□□ 1.16
CHRD-216ENST00000486066 SMRP1Q8NCR6 262 aa22.28■■□□□ 1.16
CHRD-216ENST00000486066 ZFHX2Q9C0A1 2572 aaPredicted RBP22.27■■□□□ 1.16
CHRD-216ENST00000486066 STXBP3O00186 592 aa22.27■■□□□ 1.16
CHRD-216ENST00000486066 COASYQ13057 564 aa22.27■■□□□ 1.16
CHRD-216ENST00000486066 IER5LQ5T953 404 aa22.27■■□□□ 1.16
CHRD-216ENST00000486066 RTN4RL1Q86UN2 441 aaPredicted RBP22.27■■□□□ 1.16
CHRD-216ENST00000486066 SPPL3Q8TCT6 385 aa22.27■■□□□ 1.16
CHRD-216ENST00000486066 SNX27Q96L92 541 aa22.27■■□□□ 1.16
CHRD-216ENST00000486066 SENP2Q9HC62 589 aa22.27■■□□□ 1.16
CHRD-216ENST00000486066 RTEL1Q9NZ71 1219 aa22.27■■□□□ 1.16
CHRD-216ENST00000486066 GLP2RO95838 553 aa22.26■■□□□ 1.15
CHRD-216ENST00000486066 ITGB1P05556 798 aa22.26■■□□□ 1.15
CHRD-216ENST00000486066 BTG3Q14201 252 aaPredicted RBP22.26■■□□□ 1.15
CHRD-216ENST00000486066 NAALADL2Q58DX5 795 aa22.26■■□□□ 1.15
CHRD-216ENST00000486066 PCNX4Q63HM2 1172 aa22.26■■□□□ 1.15
CHRD-216ENST00000486066 TRIM67Q6ZTA4 783 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms