RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 VCANP13611 3396 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 LINC01553A4QN01 128 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 RRN3P2A6NIE6 340 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 ZBTB43O43298 467 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 ATP9AO75110 1047 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 CTSHP09668 335 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 ITGB5P18084 799 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 TFF2Q03403 129 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 PTPROQ16827 1216 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 FAM26DQ5JW98 314 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 RPAINQ86UA6 219 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 MICU3Q86XE3 530 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 TOP1MTQ969P6 601 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 SDF4Q9BRK5 362 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 UBIAD1Q9Y5Z9 338 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 V9GY48 417 aaPredicted RBP15.75■□□□□ 0.11
SCAF4-206ENST00000485790 TTC28Q96AY4 2481 aa15.75■□□□□ 0.11
SCAF4-206ENST00000485790 CCDC196A0A1B0GTZ2 297 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 ARHGEF15O94989 841 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 UPP2O95045 317 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 KCNA2P16389 499 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 NAPAP54920 295 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 HTRA4P83105 476 aaPredicted RBP15.74■□□□□ 0.11
SCAF4-206ENST00000485790 PPFIA1Q13136 1202 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 RTN1Q16799 776 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 TCTN1Q2MV58 587 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 TSGA10IPQ3SY00 556 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 KRT40Q6A162 431 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 TRIM50Q86XT4 487 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 RAB11FIP4Q86YS3 637 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 FBXO22Q8NEZ5 403 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
SCAF4-206ENST00000485790 IFIH1Q9BYX4 1025 aaKnown RBP15.74■□□□□ 0.11
SCAF4-206ENST00000485790 CHD7Q9P2D1 2997 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 GSTTP1A0A1W2PQM5 241 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 hCG_1984214I3L0E3 225 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 LPXNO60711 386 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 ZNF76P36508 570 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 ADAM17P78536 824 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 EXOSC10Q01780 885 aaKnown RBP15.73■□□□□ 0.11
SCAF4-206ENST00000485790 UBE2SQ16763 222 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 IER5Q5VY09 327 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 APOA5Q6Q788 366 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 ZNF713Q8N859 430 aaPredicted RBP15.73■□□□□ 0.11
SCAF4-206ENST00000485790 IL17RAQ96F46 866 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 MXRA8Q9BRK3 442 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 JPH1Q9HDC5 661 aaPredicted RBP15.73■□□□□ 0.11
SCAF4-206ENST00000485790 RIC8AQ9NPQ8 531 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 KCNH7Q9NS40 1196 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 PKD2L1Q9P0L9 805 aa15.73■□□□□ 0.11
SCAF4-206ENST00000485790 SMCO2A6NFE2 343 aa15.72■□□□□ 0.11
SCAF4-206ENST00000485790 ADCY7P51828 1080 aa15.72■□□□□ 0.11
SCAF4-206ENST00000485790 GRIK4Q16099 956 aa15.72■□□□□ 0.11
SCAF4-206ENST00000485790 MCTP2Q6DN12 878 aa15.72■□□□□ 0.11
SCAF4-206ENST00000485790 PPP1R18Q6NYC8 613 aa15.72■□□□□ 0.11
SCAF4-206ENST00000485790 SLC9A2Q9UBY0 812 aa15.72■□□□□ 0.11
SCAF4-206ENST00000485790 TUBE1Q9UJT0 475 aa15.72■□□□□ 0.11
SCAF4-206ENST00000485790 NAP1L2Q9ULW6 460 aaPredicted RBP15.72■□□□□ 0.11
SCAF4-206ENST00000485790 LAMA4Q16363 1823 aa15.72■□□□□ 0.11
SCAF4-206ENST00000485790 M0QZ92 97 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 CDC45O75419 566 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 CHRNA1P02708 482 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 MARK3P27448 753 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 KCNQ1P51787 676 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 RCAN1P53805 252 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 CEP55Q53EZ4 464 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 FAM43BQ6ZT52 329 aaPredicted RBP15.71■□□□□ 0.11
SCAF4-206ENST00000485790 PLPPR4Q7Z2D5 763 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 FIBCD1Q8N539 461 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 SP7Q8TDD2 431 aaPredicted RBP15.71■□□□□ 0.11
SCAF4-206ENST00000485790 GDPD5Q8WTR4 605 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 C1QTNF1Q9BXJ1 281 aa15.71■□□□□ 0.11
SCAF4-206ENST00000485790 TRANK1O15050 2925 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 KLF18A0A0U1RQI7 1052 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 GOLGA8AA7E2F4 631 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 GOLGA8BA8MQT2 603 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 ENPP3O14638 875 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 INSRRP14616 1297 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 SLC26A2P50443 739 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 STAT5BP51692 787 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 IGBP1P78318 339 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 AP3B2Q13367 1082 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 GPM6BQ13491 265 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 EPC2Q52LR7 807 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 WWC2Q6AWC2 1192 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 TMEM192Q8IY95 271 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 NME8Q8N427 588 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 CCDC12Q8WUD4 166 aaPredicted RBP15.7■□□□□ 0.1
SCAF4-206ENST00000485790 DNAJB3Q8WWF6 145 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 MRPL38Q96DV4 380 aaKnown RBP15.7■□□□□ 0.1
SCAF4-206ENST00000485790 C17orf80Q9BSJ5 609 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 BARHL2Q9NY43 387 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 BRPF3Q9ULD4 1205 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 TRPC6Q9Y210 931 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 RWDD3Q9Y3V2 267 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 TELO2Q9Y4R8 837 aa15.7■□□□□ 0.1
SCAF4-206ENST00000485790 NFASCO94856 1347 aa15.69■□□□□ 0.1
SCAF4-206ENST00000485790 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.69■□□□□ 0.1
SCAF4-206ENST00000485790 MBLAC1A4D2B0 266 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms