RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 PTPRN2Q92932 1015 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 SAMD11Q96NU1 681 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 CDIP1Q9H305 208 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 IPPKQ9H8X2 491 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 NKRFO15226 690 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMC4-215ENST00000484799 PPP2CBP62714 309 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 PPP2CAP67775 309 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 NFATC3Q12968 1075 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 RASGRF1Q13972 1273 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 PUM1Q14671 1186 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMC4-215ENST00000484799 SMAD2Q15796 467 aaKnown RBP6.39□□□□□ -1.39
SMC4-215ENST00000484799 NTRK3Q16288 839 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 CRY1Q16526 586 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 ZNF568Q3ZCX4 644 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 SOGA3Q5TF21 947 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 BTBD8Q5XKL5 378 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 DPP8Q6V1X1 898 aaPredicted RBP6.39□□□□□ -1.39
SMC4-215ENST00000484799 KCTD1Q719H9 257 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 SPATC1Q76KD6 591 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 ZBTB38Q8NAP3 1195 aaPredicted RBP6.39□□□□□ -1.39
SMC4-215ENST00000484799 FBXW5Q969U6 566 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 YTHDC1Q96MU7 727 aaKnown RBP6.39□□□□□ -1.39
SMC4-215ENST00000484799 RIC8BQ9NVN3 520 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 HSPBP1Q9NZL4 362 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 ARHGAP28Q9P2N2 729 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 TRAF6Q9Y4K3 522 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 KDM2BQ8NHM5 1336 aa6.39□□□□□ -1.39
SMC4-215ENST00000484799 LTFP02788 710 aa6.38□□□□□ -1.39
SMC4-215ENST00000484799 SRGAP2CP0DJJ0 459 aa6.38□□□□□ -1.39
SMC4-215ENST00000484799 PFKPQ01813 784 aa6.38□□□□□ -1.39
SMC4-215ENST00000484799 SKIDA1Q1XH10 827 aa6.38□□□□□ -1.39
SMC4-215ENST00000484799 FAM47CQ5HY64 1035 aa6.38□□□□□ -1.39
SMC4-215ENST00000484799 ZC3H7AQ8IWR0 971 aaKnown RBP6.38□□□□□ -1.39
SMC4-215ENST00000484799 IFNL2Q8IZJ0 200 aa6.38□□□□□ -1.39
SMC4-215ENST00000484799 DEF6Q9H4E7 631 aa6.38□□□□□ -1.39
SMC4-215ENST00000484799 RBPJLQ9UBG7 517 aa6.38□□□□□ -1.39
SMC4-215ENST00000484799 CHGBP05060 677 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 KRT15P19012 456 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 GABREP78334 506 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 GPR19Q15760 415 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 FAM209AQ5JX71 171 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 PHF19Q5T6S3 580 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 ARHGAP36Q6ZRI8 547 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 LIMS2Q7Z4I7 341 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 CIR1Q86X95 450 aaPredicted RBP6.37□□□□□ -1.39
SMC4-215ENST00000484799 KISS1RQ969F8 398 aaPredicted RBP6.37□□□□□ -1.39
SMC4-215ENST00000484799 C8orf49Q96NF6 230 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 DHRS4Q9BTZ2 278 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 ZFP69BQ9UJL9 534 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 MYRFQ9Y2G1 1151 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 PCDHA8Q9Y5H6 950 aa6.37□□□□□ -1.39
SMC4-215ENST00000484799 H0Y858 1186 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 DNM2P50570 870 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 ZC3H12BQ5HYM0 836 aaKnown RBP6.36□□□□□ -1.39
SMC4-215ENST00000484799 CPZQ66K79 652 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 RALYLQ86SE5 291 aaKnown RBP6.36□□□□□ -1.39
SMC4-215ENST00000484799 STPG3Q8N7X2 389 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 DTX3Q8N9I9 347 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 IGDCC4Q8TDY8 1250 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 SRPK1Q96SB4 655 aaKnown RBP6.36□□□□□ -1.39
SMC4-215ENST00000484799 CD244Q9BZW8 370 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 IGSF5Q9NSI5 407 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 ATP23Q9Y6H3 246 aa6.36□□□□□ -1.39
SMC4-215ENST00000484799 B4GALT3O60512 393 aa6.35□□□□□ -1.39
SMC4-215ENST00000484799 CD276Q5ZPR3 534 aa6.35□□□□□ -1.39
SMC4-215ENST00000484799 C16orf59Q7L2K0 433 aa6.35□□□□□ -1.39
SMC4-215ENST00000484799 GGNQ86UU5 652 aa6.35□□□□□ -1.39
SMC4-215ENST00000484799 TTC9BQ8N6N2 239 aa6.35□□□□□ -1.39
SMC4-215ENST00000484799 ZCCHC14Q8WYQ9 949 aaKnown RBP6.35□□□□□ -1.39
SMC4-215ENST00000484799 RBM15Q96T37 977 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMC4-215ENST00000484799 TACO1Q9BSH4 297 aaKnown RBP6.35□□□□□ -1.39
SMC4-215ENST00000484799 MSRB2Q9Y3D2 182 aa6.35□□□□□ -1.39
SMC4-215ENST00000484799 ASXL2Q76L83 1435 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 PYGMP11217 842 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 GJA4P35212 333 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 ADAM17P78536 824 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 NFKB2Q00653 900 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 LONRF2Q1L5Z9 754 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 HS1BP3Q53T59 392 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 SLFN13Q68D06 897 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 Q6ZUG5 572 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 OSTM1Q86WC4 334 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 NUDT10Q8NFP7 164 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 NUDT11Q96G61 164 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 MAGEB10Q96LZ2 347 aaPredicted RBP6.34□□□□□ -1.39
SMC4-215ENST00000484799 CDK5RAP1Q96SZ6 601 aaKnown RBP6.34□□□□□ -1.39
SMC4-215ENST00000484799 SLC39A2Q9NP94 309 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 NDOR1Q9UHB4 597 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 ST6GALNAC2Q9UJ37 374 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 PCDHA9Q9Y5H5 950 aa6.34□□□□□ -1.39
SMC4-215ENST00000484799 PRAMEF25A6NGN4 478 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 EFCAB14O75071 495 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 FAM153BP0C7A2 387 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 PDE6AP16499 860 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 PTPN1P18031 435 aaKnown RBP6.33□□□□□ -1.4
SMC4-215ENST00000484799 EPHA5P54756 1037 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 SF3A1Q15459 793 aaKnown RBP6.33□□□□□ -1.4
SMC4-215ENST00000484799 WDR72Q3MJ13 1102 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 LRP10Q7Z4F1 713 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms