RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 RXRAP19793 462 aa13.15□□□□□ -0.3
SCFD1-206ENST00000484733 SAMD11Q96NU1 681 aa13.15□□□□□ -0.3
SCFD1-206ENST00000484733 NEK1Q96PY6 1258 aa13.15□□□□□ -0.3
SCFD1-206ENST00000484733 UHRF1Q96T88 793 aaPredicted RBP13.15□□□□□ -0.3
SCFD1-206ENST00000484733 SPDYE3A6NKU9 549 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 hCG_1984214I3L0E3 225 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 TCF7P36402 384 aaPredicted RBP13.14□□□□□ -0.31
SCFD1-206ENST00000484733 PPP1R18Q6NYC8 613 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 SPRED2Q7Z698 418 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 TRIM50Q86XT4 487 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 ZNF713Q8N859 430 aaPredicted RBP13.14□□□□□ -0.31
SCFD1-206ENST00000484733 LMBR1Q8WVP7 490 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 LRRC2Q9BYS8 371 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 SUGCTQ9HAC7 445 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 CNTNAP5Q8WYK1 1306 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 RCAN1P53805 252 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 ARHGAP4P98171 946 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 UBE2SQ16763 222 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 KRT40Q6A162 431 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 TAF2Q6P1X5 1199 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 APOA5Q6Q788 366 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
SCFD1-206ENST00000484733 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
SCFD1-206ENST00000484733 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-206ENST00000484733 FUT2Q10981 343 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 MTMR1Q13613 665 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 SKIV2LQ15477 1246 aaKnown RBP13.13□□□□□ -0.31
SCFD1-206ENST00000484733 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 SMARCAD1Q9H4L7 1026 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 RIC8AQ9NPQ8 531 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 ERAP1Q9NZ08 941 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 KAT6AQ92794 2004 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 CHD7Q9P2D1 2997 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 NFASCO94856 1347 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 MBLAC1A4D2B0 266 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-206ENST00000484733 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
SCFD1-206ENST00000484733 MGAT3Q09327 533 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 KRT32Q14532 448 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 WWC2Q6AWC2 1192 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 RAB11FIP4Q86YS3 637 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 GDPD5Q8WTR4 605 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 HLA-CQ95604 372 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 OSBPL7Q9BZF2 842 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 GLT8D2Q9H1C3 349 aa13.13□□□□□ -0.31
SCFD1-206ENST00000484733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
SCFD1-206ENST00000484733 hCG_1642624A0A1W2PR95 340 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 CTSHP09668 335 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 SP4Q02446 784 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 TFF2Q03403 129 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 RTN1Q16799 776 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 MYOCDQ8IZQ8 938 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 BRPF3Q9ULD4 1205 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 PRUNE2Q8WUY3 3088 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 RRN3P2A6NIE6 340 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 ZBTB43O43298 467 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 CHRNA1P02708 482 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 HMGB1P09429 215 aaKnown RBP13.12□□□□□ -0.31
SCFD1-206ENST00000484733 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 GRIK4Q16099 956 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 FAM117BQ6P1L5 589 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 RSPH3Q86UC2 560 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 FBXO22Q8NEZ5 403 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 KCNB2Q92953 911 aa13.12□□□□□ -0.31
SCFD1-206ENST00000484733 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
SCFD1-206ENST00000484733 CDC45O75419 566 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 RUFY4Q6ZNE9 571 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
SCFD1-206ENST00000484733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.11□□□□□ -0.31
SCFD1-206ENST00000484733 STXBP3O00186 592 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 CLK2P49760 499 aaKnown RBP13.11□□□□□ -0.31
SCFD1-206ENST00000484733 KCNQ1P51787 676 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 NAPAP54920 295 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 MARCH8Q5T0T0 291 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
SCFD1-206ENST00000484733 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 PLPPR4Q7Z2D5 763 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 PCYT2Q99447 389 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 C17orf80Q9BSJ5 609 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 IFIH1Q9BYX4 1025 aaKnown RBP13.11□□□□□ -0.31
SCFD1-206ENST00000484733 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
SCFD1-206ENST00000484733 KCNH7Q9NS40 1196 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
SCFD1-206ENST00000484733 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 SLC9A2Q9UBY0 812 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 SQORQ9Y6N5 450 aa13.11□□□□□ -0.31
SCFD1-206ENST00000484733 V9GY48 417 aaPredicted RBP13.11□□□□□ -0.31
SCFD1-206ENST00000484733 RALGAPA2Q2PPJ7 1873 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 ADCY7P51828 1080 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 GLG1Q92896 1179 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 TUBE1Q9UJT0 475 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 TRANK1O15050 2925 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 MEIS1O00470 390 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 ATG7O95352 703 aa13.1□□□□□ -0.31
SCFD1-206ENST00000484733 LPIN1Q14693 890 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms