RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 C2CD2Q9Y426 696 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 FAM205AQ6ZU69 1335 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 BAZ2BQ9UIF8 2168 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 ABCD1P33897 745 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 EVA1CP58658 441 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 KIF5AQ12840 1032 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 CDC37Q16543 378 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 LRRC23Q53EV4 343 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 NUGGCQ68CJ6 796 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 TRIM68Q6AZZ1 485 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 CNOT8Q9UFF9 292 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 SLC12A4Q9UP95 1085 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 F8W031 263 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 STXBP3O00186 592 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 SETSIPP0DME0 302 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 CCNE1P24864 410 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 DYNLL1P63167 89 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 KCNJ2P63252 427 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 ZNF268Q14587 947 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 NFRKBQ6P4R8 1299 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 MYLK4Q86YV6 388 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 RBM12BQ8IXT5 1001 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 OR2W6PQ8NHA6 318 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 ZFAND2BQ8WV99 257 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 TAF1DQ9H5J8 278 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 EPB41L5Q9HCM4 733 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 GOPCQ9HD26 462 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 RBM12Q9NTZ6 932 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 A8MUI8 341 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 LGR5O75473 907 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 VEGFAP15692 232 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 DRD4P21917 467 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 TPP2P29144 1249 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 COBLL1Q53SF7 1204 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 FAM133BQ5BKY9 247 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 DAGLBQ8NCG7 672 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 ATL2Q8NHH9 583 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 P2RX5Q93086 422 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 KCNMB3Q9NPA1 279 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 GOLGA6L10A6NI86 522 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 USP17L12C9JPN9 530 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 USP17L21D6R901 530 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 ALADP13716 330 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 UBA7P41226 1012 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 NT5C2P49902 561 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 CYP27A1Q02318 531 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 GUCY2DQ02846 1103 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 CUL3Q13618 768 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 TAF11Q15544 211 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 TRADDQ15628 312 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 IFT20Q8IY31 132 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 C1orf131Q8NDD1 294 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 ZNF384Q8TF68 577 aa12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 CNOT6LQ96LI5 555 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-205ENST00000483956 COL4A1P02462 1669 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 LCA5LO95447 670 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 GALNT17Q6IS24 598 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 SH2D4AQ9H788 454 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 MAST2Q6P0Q8 1798 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 LRRD1A4D1F6 860 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 ZNF263O14978 683 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 NMT2O60551 498 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 TACC1O75410 805 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 NTSR2O95665 410 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 CCND1P24385 295 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 ALDH5A1P51649 535 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 UBE4AQ14139 1066 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 SPA17Q15506 151 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 ODF2Q5BJF6 829 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 MREGQ8N565 214 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 NAF1Q96HR8 494 aaKnown RBP12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 TRIM4Q9C037 500 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 PCMTD2Q9NV79 361 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 PLAGL2Q9UPG8 496 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 CASZ1Q86V15 1759 aa12.65□□□□□ -0.38
SEC61A1-205ENST00000483956 FLT1P17948 1338 aa12.65□□□□□ -0.39
SEC61A1-205ENST00000483956 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 USO1O60763 962 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 HEXIM1O94992 359 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 MYZAPP0CAP1 466 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 KLK7P49862 253 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 ARMC9Q7Z3E5 817 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 CNBD1Q8NA66 436 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC197Q8NCU1 140 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC42Q96M95 316 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 AK8Q96MA6 479 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 MMTAG2Q9BU76 263 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 GDF3Q9NR23 364 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC194A0A1B0GVG4 234 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 PP2D1A8MPX8 630 aa12.64□□□□□ -0.39
SEC61A1-205ENST00000483956 GYG1P46976 350 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms