RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 C7orf31Q8N865 590 aa17.68■□□□□ 0.42
RPP40-206ENST00000483546 SLC5A5Q92911 643 aa17.68■□□□□ 0.42
RPP40-206ENST00000483546 INTS4Q96HW7 963 aaKnown RBP17.68■□□□□ 0.42
RPP40-206ENST00000483546 SMARCAD1Q9H4L7 1026 aa17.68■□□□□ 0.42
RPP40-206ENST00000483546 DDX25Q9UHL0 483 aaKnown RBP17.68■□□□□ 0.42
RPP40-206ENST00000483546 WDR81Q562E7 1941 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 GSTTP1A0A1W2PQM5 241 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 TBX3O15119 743 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 MSH4O15457 936 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 LGR5O75473 907 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 ATG7O95352 703 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 TDP2O95551 362 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 GJB2P29033 226 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 SLC26A2P50443 739 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 FOSBP53539 338 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 ACTR2P61160 394 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 SP4Q02446 784 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 ORC2Q13416 577 aaPredicted RBP17.67■□□□□ 0.42
RPP40-206ENST00000483546 FAM47CQ5HY64 1035 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
RPP40-206ENST00000483546 FAM20AQ96MK3 541 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 AZI2Q9H6S1 392 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 TMEM39AQ9NV64 488 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 ERAP1Q9NZ08 941 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 GTF2IRD1Q9UHL9 959 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 TBX21Q9UL17 535 aa17.67■□□□□ 0.42
RPP40-206ENST00000483546 B4GALT4O60513 344 aa17.66■□□□□ 0.42
RPP40-206ENST00000483546 GAS7O60861 476 aa17.66■□□□□ 0.42
RPP40-206ENST00000483546 GUCY1B3Q02153 619 aa17.66■□□□□ 0.42
RPP40-206ENST00000483546 GNL2Q13823 731 aaKnown RBP17.66■□□□□ 0.42
RPP40-206ENST00000483546 RDM1Q8NG50 284 aa17.66■□□□□ 0.42
RPP40-206ENST00000483546 LBHD1Q9BQE6 289 aaPredicted RBP17.66■□□□□ 0.42
RPP40-206ENST00000483546 TEKT3Q9BXF9 490 aa17.66■□□□□ 0.42
RPP40-206ENST00000483546 PRDM5Q9NQX1 630 aaPredicted RBP17.66■□□□□ 0.42
RPP40-206ENST00000483546 ZMYND8Q9ULU4 1186 aaPredicted RBP17.66■□□□□ 0.42
RPP40-206ENST00000483546 IGKV6D-21A0A0A0MT36 114 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 CCNT1O60563 726 aaKnown RBP17.65■□□□□ 0.42
RPP40-206ENST00000483546 GNAT1P11488 350 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 PDCP20941 246 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.42
RPP40-206ENST00000483546 SFNP31947 248 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 TRAPPC10P48553 1259 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 EARS2Q5JPH6 523 aaKnown RBP17.65■□□□□ 0.42
RPP40-206ENST00000483546 UTP14CQ5TAP6 766 aaKnown RBP17.65■□□□□ 0.42
RPP40-206ENST00000483546 LRCH2Q5VUJ6 765 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 FAM160B1Q5W0V3 765 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 MIS18BP1Q6P0N0 1132 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 PLPPR4Q7Z2D5 763 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 NOSTRINQ8IVI9 506 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 ETNPPLQ8TBG4 499 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 AFAP1L1Q8TED9 768 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 GLG1Q92896 1179 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 KCNMB3Q9NPA1 279 aa17.65■□□□□ 0.42
RPP40-206ENST00000483546 WDR64B1ANS9 1081 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 H3BQV1 296 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 DDX39AO00148 427 aaKnown RBP17.64■□□□□ 0.41
RPP40-206ENST00000483546 PSMD10O75832 226 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 CCNE2O96020 404 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 RAG1P15918 1043 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 SYN1P17600 705 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 HOXC8P31273 242 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 JAK3P52333 1124 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 ABHD15Q6UXT9 468 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 SLFN12Q8IYM2 578 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 HDAC6Q9UBN7 1215 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
RPP40-206ENST00000483546 NOD1Q9Y239 953 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 PCDHA10Q9Y5I2 948 aa17.64■□□□□ 0.41
RPP40-206ENST00000483546 TRIP12Q14669 1992 aaPredicted RBP17.64■□□□□ 0.41
RPP40-206ENST00000483546 TRIM43BA6NCK2 446 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 FAM205CA6NFA0 338 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 SLC37A4O43826 429 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
RPP40-206ENST00000483546 TIMP1P01033 207 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 PSAPP07602 524 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 BMP8BP34820 402 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 STAT5BP51692 787 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 CHMP4BP1P59074 171 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 PTGISQ16647 500 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 LARP1BQ659C4 914 aaKnown RBP17.63■□□□□ 0.41
RPP40-206ENST00000483546 SH3RF1Q7Z6J0 888 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 TRIM50Q86XT4 487 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 CCDC155Q8N6L0 562 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 TRIM43Q96BQ3 446 aaPredicted RBP17.63■□□□□ 0.41
RPP40-206ENST00000483546 GDF15Q99988 308 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 TRPV6Q9H1D0 765 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 TRMT13Q9NUP7 481 aaKnown RBP17.63■□□□□ 0.41
RPP40-206ENST00000483546 TELO2Q9Y4R8 837 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 NRCAMQ92823 1304 aa17.63■□□□□ 0.41
RPP40-206ENST00000483546 C17orf102A2RUQ5 167 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 PITPNM1O00562 1244 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 SMIM10L2AP0DMW4 78 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 SMIM10L2BP0DMW5 78 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 BFSP2Q13515 415 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 GDF6Q6KF10 455 aaPredicted RBP17.62■□□□□ 0.41
RPP40-206ENST00000483546 B3GNT9Q6UX72 402 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 CAGE1Q8TC20 777 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 PCYT2Q99447 389 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 HIPK3Q9H422 1215 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms