RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 ITGB5P18084 799 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 UBA1P22314 1058 aaKnown RBP10.94□□□□□ -0.66
HMG20B-210ENST00000483417 PSEN2P49810 448 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 RBL2Q08999 1139 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 PIK3AP1Q6ZUJ8 805 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 OTOP2Q7RTS6 562 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 DIS3L2Q8IYB7 885 aaKnown RBP10.94□□□□□ -0.66
HMG20B-210ENST00000483417 DAGLBQ8NCG7 672 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 DHX38Q92620 1227 aaKnown RBP10.94□□□□□ -0.66
HMG20B-210ENST00000483417 HDAC6Q9UBN7 1215 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 GTF2IRD1Q9UHL9 959 aa10.94□□□□□ -0.66
HMG20B-210ENST00000483417 SPDYE3A6NKU9 549 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 FAM86B1E9PN63 330 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 SORBS3O60504 671 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 ATP9AO75110 1047 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 PFKMP08237 780 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 FAM86B2P0C5J1 330 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 ARP10275 920 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 RFC2P35250 354 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 KRT2P35908 639 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 TOB1P50616 345 aaPredicted RBP10.93□□□□□ -0.66
HMG20B-210ENST00000483417 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 PTGISQ16647 500 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 INF2Q27J81 1249 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
HMG20B-210ENST00000483417 PCNX4Q63HM2 1172 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 XRRA1Q6P2D8 792 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 TRAF7Q6Q0C0 670 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 REXO1Q8N1G1 1221 aaKnown RBP10.93□□□□□ -0.66
HMG20B-210ENST00000483417 CCDC148Q8NFR7 591 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 TBCKQ8TEA7 893 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 CCDC12Q8WUD4 166 aaPredicted RBP10.93□□□□□ -0.66
HMG20B-210ENST00000483417 FOXD4L4Q8WXT5 416 aaPredicted RBP10.93□□□□□ -0.66
HMG20B-210ENST00000483417 MYLIPQ8WY64 445 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 GJA10Q969M2 543 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 TIFAQ96CG3 184 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 SPATA33Q96N06 139 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 ZNF576Q9H609 170 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 ZDHHC9Q9Y397 364 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 UBIAD1Q9Y5Z9 338 aa10.93□□□□□ -0.66
HMG20B-210ENST00000483417 MYH7BA7E2Y1 1941 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 FIBPO43427 364 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 FOSP01100 380 aaPredicted RBP10.92□□□□□ -0.66
HMG20B-210ENST00000483417 ZNF286BP0CG31 522 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 XBP1P17861 261 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 ATP2B1P20020 1258 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 HOXC8P31273 242 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 SREBF1P36956 1147 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 BFSP2Q13515 415 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 TRIM29Q14134 588 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 NBR1Q14596 966 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 MFSD10Q14728 455 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 KIAA0753Q2KHM9 967 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 TRIM71Q2Q1W2 868 aaKnown RBP10.92□□□□□ -0.66
HMG20B-210ENST00000483417 GALNT17Q6IS24 598 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 FAM173BQ6P4H8 233 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 FERMT3Q86UX7 667 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 RETREG2Q8NC44 543 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 BICD2Q8TD16 824 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 WNT8BQ93098 351 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 SENP7Q9BQF6 1050 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 KATNAL1Q9BW62 490 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 GLT8D2Q9H1C3 349 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 MLXIPQ9HAP2 919 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 MTMR6Q9Y217 621 aa10.92□□□□□ -0.66
HMG20B-210ENST00000483417 YBX2Q9Y2T7 364 aaKnown RBP10.92□□□□□ -0.66
HMG20B-210ENST00000483417 CDH23Q9H251 3354 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 H3BRB1 525 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 MEIS1O00470 390 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 TDP2O95551 362 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 CYP3A4P08684 503 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 CKBP12277 381 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 U2AF2P26368 475 aaKnown RBP eCLIP10.91□□□□□ -0.664e-7■■■■□ 20.4
HMG20B-210ENST00000483417 CHMP4BP1P59074 171 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 ZNF200P98182 395 aaPredicted RBP10.91□□□□□ -0.66
HMG20B-210ENST00000483417 AP3B2Q13367 1082 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 NEDD9Q14511 834 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 GNPTABQ3T906 1256 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 MCTP1Q6DN14 999 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 METTL7BQ6UX53 244 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 C7orf31Q8N865 590 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 CAGE1Q8TC20 777 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 AFAP1L1Q8TED9 768 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 CHAMP1Q96JM3 812 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 GPR20Q99678 358 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 MXRA8Q9BRK3 442 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 MTIF3Q9H2K0 278 aaKnown RBP10.91□□□□□ -0.66
HMG20B-210ENST00000483417 TUT1Q9H6E5 874 aaKnown RBP10.91□□□□□ -0.66
HMG20B-210ENST00000483417 JADE2Q9NQC1 790 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 SLC4A7Q9Y6M7 1214 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 SCN5AQ14524 2016 aa10.91□□□□□ -0.66
HMG20B-210ENST00000483417 IGLV3-22A0A075B6J6 115 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 CCDC194A0A1B0GVG4 234 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 VPS37CA5D8V6 355 aaPredicted RBP10.9□□□□□ -0.66
HMG20B-210ENST00000483417 H3BQV1 296 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 RBAK-RBAKDNI3L0D1 243 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 NBNO60934 754 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 CXCL10P02778 98 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms