RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 ZKSCAN5Q9Y2L8 839 aa8.04□□□□□ -1.12
PMS1-219ENST00000483293 PRKAB1Q9Y478 270 aa8.04□□□□□ -1.12
PMS1-219ENST00000483293 ATP23Q9Y6H3 246 aa8.04□□□□□ -1.12
PMS1-219ENST00000483293 FAM90A27PA6NNH2 459 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 ATF2P15336 505 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 CANXP27824 592 aaKnown RBP8.03□□□□□ -1.12
PMS1-219ENST00000483293 STAT3P40763 770 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 SCNN1BP51168 640 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 MECP2P51608 486 aaKnown RBP8.03□□□□□ -1.12
PMS1-219ENST00000483293 TMEM132BQ14DG7 1078 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 SEC23AQ15436 765 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 PHOSPHO1Q8TCT1 267 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 DDX11Q96FC9 970 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 RBPJLQ9UBG7 517 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 MAPRE3Q9UPY8 281 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 NUB1Q9Y5A7 615 aa8.03□□□□□ -1.12
PMS1-219ENST00000483293 PEX10O60683 326 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 POU3F2P20265 443 aaPredicted RBP8.02□□□□□ -1.13
PMS1-219ENST00000483293 SOX5P35711 763 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 NFKB2Q00653 900 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 IRF9Q00978 393 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 SART3Q15020 963 aaKnown RBP8.02□□□□□ -1.13
PMS1-219ENST00000483293 ZNF648Q5T619 568 aaPredicted RBP8.02□□□□□ -1.13
PMS1-219ENST00000483293 ETV3LQ6ZN32 361 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 AMIGO3Q86WK7 504 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 TRIM48Q8IWZ4 208 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 NLGN4XQ8N0W4 816 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 MZB1Q8WU39 189 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 CHTF18Q8WVB6 975 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 B4GALT6Q9UBX8 382 aa8.02□□□□□ -1.13
PMS1-219ENST00000483293 TEX51A0A1B0GUA7 166 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.01□□□□□ -1.13
PMS1-219ENST00000483293 PRAMEF25A6NGN4 478 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 ACOT7O00154 380 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 ETV2O00321 342 aaPredicted RBP8.01□□□□□ -1.13
PMS1-219ENST00000483293 BUB1BO60566 1050 aaPredicted RBP8.01□□□□□ -1.13
PMS1-219ENST00000483293 GAS7O60861 476 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 ZBTB48P10074 688 aaPredicted RBP8.01□□□□□ -1.13
PMS1-219ENST00000483293 NCAM1P13591 858 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 ATP2A2P16615 1042 aaKnown RBP8.01□□□□□ -1.13
PMS1-219ENST00000483293 PTPN1P18031 435 aaKnown RBP8.01□□□□□ -1.13
PMS1-219ENST00000483293 LIMS1P48059 325 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 IL2P60568 153 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 DLG4P78352 724 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 PAN2Q504Q3 1202 aaKnown RBP8.01□□□□□ -1.13
PMS1-219ENST00000483293 CYP4F22Q6NT55 531 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 OR2W6PQ8NHA6 318 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 TOE1Q96GM8 510 aaKnown RBP8.01□□□□□ -1.13
PMS1-219ENST00000483293 GCM1Q9NP62 436 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 FAN1Q9Y2M0 1017 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 PCDHA5Q9Y5H7 936 aa8.01□□□□□ -1.13
PMS1-219ENST00000483293 HRKO00198 91 aa8□□□□□ -1.13
PMS1-219ENST00000483293 F2P00734 622 aa8□□□□□ -1.13
PMS1-219ENST00000483293 LRG1P02750 347 aa8□□□□□ -1.13
PMS1-219ENST00000483293 TMEM253P0C7T8 217 aa8□□□□□ -1.13
PMS1-219ENST00000483293 SLC9A1P19634 815 aa8□□□□□ -1.13
PMS1-219ENST00000483293 ID4P47928 161 aa8□□□□□ -1.13
PMS1-219ENST00000483293 MESP2Q0VG99 397 aa8□□□□□ -1.13
PMS1-219ENST00000483293 ARHGAP44Q17R89 818 aa8□□□□□ -1.13
PMS1-219ENST00000483293 HHIPL2Q6UWX4 724 aa8□□□□□ -1.13
PMS1-219ENST00000483293 KRT26Q7Z3Y9 468 aa8□□□□□ -1.13
PMS1-219ENST00000483293 FAM126BQ8IXS8 530 aa8□□□□□ -1.13
PMS1-219ENST00000483293 ERCC4Q92889 916 aaPredicted RBP8□□□□□ -1.13
PMS1-219ENST00000483293 USP7Q93009 1102 aa8□□□□□ -1.13
PMS1-219ENST00000483293 BOCQ9BWV1 1114 aa8□□□□□ -1.13
PMS1-219ENST00000483293 DTLQ9NZJ0 730 aa8□□□□□ -1.13
PMS1-219ENST00000483293 HIP1RO75146 1068 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 FARP2O94887 1054 aaPredicted RBP7.99□□□□□ -1.13
PMS1-219ENST00000483293 C8BP07358 591 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 FAHP16930 419 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 KIF11P52732 1056 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 TARBP2Q15633 366 aaKnown RBP7.99□□□□□ -1.13
PMS1-219ENST00000483293 FIGNQ5HY92 759 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 PHF19Q5T6S3 580 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 TEPPQ6URK8 271 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 TMC5Q6UXY8 1006 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 NOSTRINQ8IVI9 506 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 IGDCC3Q8IVU1 814 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 SMARCC2Q8TAQ2 1214 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 GPATCH3Q96I76 525 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 OXSMQ9NWU1 459 aa7.99□□□□□ -1.13
PMS1-219ENST00000483293 H7C1D1 291 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 DVL2O14641 736 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 CLASP2O75122 1294 aaKnown RBP7.98□□□□□ -1.13
PMS1-219ENST00000483293 C4BPAP04003 597 aaKnown RBP7.98□□□□□ -1.13
PMS1-219ENST00000483293 VIL1P09327 827 aaKnown RBP7.98□□□□□ -1.13
PMS1-219ENST00000483293 PFKLP17858 780 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 FBLN1P23142 703 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 EPHA5P54756 1037 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 EVA1CP58658 441 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 NKX3-2P78367 333 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 DSG1Q02413 1049 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 CACNB2Q08289 660 aaPredicted RBP7.98□□□□□ -1.13
PMS1-219ENST00000483293 PTPROQ16827 1216 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 CR1LQ2VPA4 569 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 MIB1Q86YT6 1006 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 ATL2Q8NHH9 583 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 FAM84AQ96KN4 292 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 SPTLC3Q9NUV7 552 aa7.98□□□□□ -1.13
PMS1-219ENST00000483293 COL4A3BPQ9Y5P4 624 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms