RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RBM8AQ9Y5S9 174 aaKnown RBP16.04■□□□□ 0.16
VARS-226ENST00000483275 MEIS2O14770 477 aa16.03■□□□□ 0.16
VARS-226ENST00000483275 NEDD9Q14511 834 aa16.03■□□□□ 0.16
VARS-226ENST00000483275 PCNX4Q63HM2 1172 aa16.03■□□□□ 0.16
VARS-226ENST00000483275 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
VARS-226ENST00000483275 MRPL38Q96DV4 380 aaKnown RBP16.03■□□□□ 0.16
VARS-226ENST00000483275 RRP36Q96EU6 259 aaKnown RBP16.03■□□□□ 0.16
VARS-226ENST00000483275 ZNF215Q9UL58 517 aaPredicted RBP16.03■□□□□ 0.16
VARS-226ENST00000483275 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.02■□□□□ 0.16
VARS-226ENST00000483275 PRC1O43663 620 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 ATP9AO75110 1047 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 CHRNA1P02708 482 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 TCF7P36402 384 aaPredicted RBP16.02■□□□□ 0.16
VARS-226ENST00000483275 ADAM17P78536 824 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 TRAF1Q13077 416 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 GPM6BQ13491 265 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 TCEAL5Q5H9L2 206 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 TMEM31Q5JXX7 168 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 PTCRAQ6ISU1 281 aaPredicted RBP16.02■□□□□ 0.16
VARS-226ENST00000483275 TMEM192Q8IY95 271 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.16
VARS-226ENST00000483275 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
VARS-226ENST00000483275 TOP1MTQ969P6 601 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 SPZ1Q9BXG8 430 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 LRRC2Q9BYS8 371 aa16.02■□□□□ 0.16
VARS-226ENST00000483275 SEC63Q9UGP8 760 aaKnown RBP16.02■□□□□ 0.16
VARS-226ENST00000483275 KCNA2P16389 499 aa16.01■□□□□ 0.15
VARS-226ENST00000483275 SSTR3P32745 418 aaPredicted RBP16.01■□□□□ 0.15
VARS-226ENST00000483275 CTNNB1P35222 781 aa16.01■□□□□ 0.15
VARS-226ENST00000483275 LEXMQ3ZCV2 418 aa16.01■□□□□ 0.15
VARS-226ENST00000483275 NFXL1Q6ZNB6 911 aa16.01■□□□□ 0.15
VARS-226ENST00000483275 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
VARS-226ENST00000483275 CUL5Q93034 780 aa16.01■□□□□ 0.15
VARS-226ENST00000483275 SH2B2O14492 632 aaPredicted RBP16■□□□□ 0.15
VARS-226ENST00000483275 CAND2O75155 1236 aa16■□□□□ 0.15
VARS-226ENST00000483275 STAM2O75886 525 aa16■□□□□ 0.15
VARS-226ENST00000483275 DDAH1O94760 285 aa16■□□□□ 0.15
VARS-226ENST00000483275 GNAT1P11488 350 aa16■□□□□ 0.15
VARS-226ENST00000483275 ITGB5P18084 799 aa16■□□□□ 0.15
VARS-226ENST00000483275 IGBP1P78318 339 aa16■□□□□ 0.15
VARS-226ENST00000483275 PPFIA1Q13136 1202 aa16■□□□□ 0.15
VARS-226ENST00000483275 CLUL1Q15846 466 aa16■□□□□ 0.15
VARS-226ENST00000483275 CASC1Q6TDU7 716 aa16■□□□□ 0.15
VARS-226ENST00000483275 FAM178BQ8IXR5 827 aa16■□□□□ 0.15
VARS-226ENST00000483275 BANK1Q8NDB2 785 aa16■□□□□ 0.15
VARS-226ENST00000483275 MAP4K1Q92918 833 aa16■□□□□ 0.15
VARS-226ENST00000483275 TTC3P53804 2025 aa16■□□□□ 0.15
VARS-226ENST00000483275 WDFY4Q6ZS81 3184 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 GSTTP1A0A1W2PQM5 241 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 H3BNC9 293 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 PIK3CDO00329 1044 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 KIF5BP33176 963 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 MGAT3Q09327 533 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 LPIN1Q14693 890 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 GRIK4Q16099 956 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 PTPROQ16827 1216 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 TIGD5Q53EQ6 642 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 FAM26DQ5JW98 314 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 NLRX1Q86UT6 975 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 GJD3Q8N144 294 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 DNAJB3Q8WWF6 145 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 FAM49AQ9H0Q0 323 aaPredicted RBP15.99■□□□□ 0.15
VARS-226ENST00000483275 TUBE1Q9UJT0 475 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 HCN4Q9Y3Q4 1203 aa15.99■□□□□ 0.15
VARS-226ENST00000483275 ADGRA3Q8IWK6 1321 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 CCDC69A6NI79 296 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 GRM6O15303 877 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 LINC00271P0C7V0 271 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 IBSPP21815 317 aaPredicted RBP15.98■□□□□ 0.15
VARS-226ENST00000483275 TMEM62Q0P6H9 643 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 MARCH8Q5T0T0 291 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 HEATR3Q7Z4Q2 680 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 TRAPPC12Q8WVT3 735 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 LINC01599Q8WXQ3 324 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 GLG1Q92896 1179 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 IL17RAQ96F46 866 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 PGBD1Q96JS3 809 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 SENP7Q9BQF6 1050 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 PSTPIP2Q9H939 334 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 PLXNA4Q9HCM2 1894 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 CLDND1Q9NY35 253 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 CDY2AQ9Y6F7 541 aa15.98■□□□□ 0.15
VARS-226ENST00000483275 NRCAMQ92823 1304 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 GRXCR2A6NFK2 248 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 PI4K2BG5E9Z4 385 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 GTF2F1P35269 517 aaKnown RBP eCLIP15.97■□□□□ 0.15
VARS-226ENST00000483275 MTMR1Q13613 665 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 XRRA1Q6P2D8 792 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 RPAINQ86UA6 219 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 SKAP1Q86WV1 359 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 MICU3Q86XE3 530 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 FIBCD1Q8N539 461 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 NEK9Q8TD19 979 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 APBB2Q92870 758 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 GPRASP2Q96D09 838 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 SAMD11Q96NU1 681 aa15.97■□□□□ 0.15
VARS-226ENST00000483275 LSG1Q9H089 658 aaKnown RBP15.97■□□□□ 0.15
VARS-226ENST00000483275 NSUN3Q9H649 340 aaKnown RBP15.97■□□□□ 0.15
VARS-226ENST00000483275 AGO3Q9H9G7 860 aaKnown RBP15.97■□□□□ 0.15
VARS-226ENST00000483275 SLC27A2O14975 620 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms