RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PRKAG3Q9UGI9 489 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 TELO2Q9Y4R8 837 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 SUPT16HQ9Y5B9 1047 aaKnown RBP8.55□□□□□ -1.04
CSDE1-206ENST00000483030 MUC6Q6W4X9 2439 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 PIEZO1Q92508 2521 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 COL4A4P53420 1690 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-206ENST00000483030 GRM6O15303 877 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 NCK2O43639 380 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 CHRNA1P02708 482 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 RB1P06400 928 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 ICAM3P32942 547 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 CTNNB1P35222 781 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 IRS1P35568 1242 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 ADAM17P78536 824 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 SP4Q02446 784 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 DLX2Q07687 328 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-206ENST00000483030 TRAF1Q13077 416 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 SEMA3FQ13275 785 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 CLUL1Q15846 466 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 CTC1Q2NKJ3 1217 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 FAM26DQ5JW98 314 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 CHD1LQ86WJ1 897 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 ADHFE1Q8IWW8 467 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 LMBR1Q8WVP7 490 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 PIBF1Q8WXW3 757 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 APBB2Q92870 758 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 INPP4AQ96PE3 977 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-206ENST00000483030 UPF3BQ9BZI7 483 aaKnown RBP8.54□□□□□ -1.04
CSDE1-206ENST00000483030 OSBPL3Q9H4L5 887 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 IGFLR1Q9H665 355 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 PTPRSQ13332 1948 aa8.54□□□□□ -1.04
CSDE1-206ENST00000483030 PNMA6FA0A0J9YX94 578 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 C5orf67F2Z3F1 127 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 HIP1O00291 1037 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 ENPP3O14638 875 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 FIBPO43427 364 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 CYTH3O43739 400 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 STAM2O75886 525 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 CSPG5O95196 566 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 LINC00271P0C7V0 271 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 GHRP10912 638 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 GTF2F1P35269 517 aaKnown RBP eCLIP8.53□□□□□ -1.04
CSDE1-206ENST00000483030 NHLH1Q02575 133 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 HYAL1Q12794 435 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 GRM4Q14833 912 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 SMAD2Q15796 467 aaKnown RBP8.53□□□□□ -1.04
CSDE1-206ENST00000483030 RUFY4Q6ZNE9 571 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 HFE2Q6ZVN8 426 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 SMC5Q8IY18 1101 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 C11orf84Q9BUA3 381 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-206ENST00000483030 LMAN2LQ9H0V9 348 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 IL25Q9H293 177 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 RWDD1Q9H446 243 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-206ENST00000483030 EHMT1Q9H9B1 1298 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 SENP2Q9HC62 589 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 ZNF215Q9UL58 517 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-206ENST00000483030 NRCAMQ92823 1304 aa8.53□□□□□ -1.04
CSDE1-206ENST00000483030 IFIT3O14879 490 aaKnown RBP8.52□□□□□ -1.05
CSDE1-206ENST00000483030 LINC01565O15544 149 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 MBTPS2O43462 519 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 IGHDP01880 384 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 NUCB1Q02818 461 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 TRDNQ13061 729 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 BTG3Q14201 252 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-206ENST00000483030 LPIN1Q14693 890 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 USP17L6PQ6QN14 398 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 RNF135Q8IUD6 432 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 SMARCC2Q8TAQ2 1214 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 CLP1Q92989 425 aaKnown RBP8.52□□□□□ -1.05
CSDE1-206ENST00000483030 MFSD14AQ96MC6 490 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 SENP7Q9BQF6 1050 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 ALG13Q9NP73 1137 aaKnown RBP8.52□□□□□ -1.05
CSDE1-206ENST00000483030 MUTYHQ9UIF7 546 aa8.52□□□□□ -1.05
CSDE1-206ENST00000483030 CIZ1Q9ULV3 898 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-206ENST00000483030 ERICH2A1L162 156 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 STXBP3O00186 592 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 ATP9AO75110 1047 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 TBX10O75333 385 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 DGKIO75912 1065 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 MARK3P27448 753 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 TCF7P36402 384 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-206ENST00000483030 MGAT3Q09327 533 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 TROAPQ12815 778 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 PPFIA1Q13136 1202 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 ADAM15Q13444 863 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 SMAD4Q13485 552 aaKnown RBP8.51□□□□□ -1.05
CSDE1-206ENST00000483030 CAMK1Q14012 370 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 HERC4Q5GLZ8 1057 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-206ENST00000483030 PCNX4Q63HM2 1172 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 TAF2Q6P1X5 1199 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 RSPH3Q86UC2 560 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 NLRX1Q86UT6 975 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 DNAJB3Q8WWF6 145 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 SEPT1Q8WYJ6 367 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 CUL5Q93034 780 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 ZNF689Q96CS4 500 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-206ENST00000483030 POP1Q99575 1024 aaKnown RBP8.51□□□□□ -1.05
CSDE1-206ENST00000483030 KCNH6Q9H252 994 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms