RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 ZEB2O60315 1214 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
DDR1-244ENST00000482873 HOXA10P31260 410 aaPredicted RBP16.78■□□□□ 0.28
DDR1-244ENST00000482873 GSCP56915 257 aaPredicted RBP16.78■□□□□ 0.28
DDR1-244ENST00000482873 ARID5AQ03989 594 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 NNTQ13423 1086 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 RRAGAQ7L523 313 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 CCDC91Q7Z6B0 441 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 SPICE1Q8N0Z3 855 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 PRPF38AQ8NAV1 312 aaKnown RBP16.78■□□□□ 0.28
DDR1-244ENST00000482873 RUBCNQ92622 972 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 RAD54LQ92698 747 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 COA1Q9GZY4 146 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 NDST4Q9H3R1 872 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 CUEDC2Q9H467 287 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 RBM12Q9NTZ6 932 aaKnown RBP16.78■□□□□ 0.28
DDR1-244ENST00000482873 TAF1LQ8IZX4 1826 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 MYL1P05976 194 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 FNTAP49354 379 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 KIF11P52732 1056 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 KCTD19Q17RG1 926 aaPredicted RBP16.78■□□□□ 0.28
DDR1-244ENST00000482873 CCDC181Q5TID7 509 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 CAVIN3Q969G5 261 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 ERGIC2Q96RQ1 377 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 CRAMP1Q96RY5 1269 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 HYOU1Q9Y4L1 999 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 PCDHA1Q9Y5I3 950 aa16.78■□□□□ 0.28
DDR1-244ENST00000482873 TCP1P17987 556 aaKnown RBP16.77■□□□□ 0.28
DDR1-244ENST00000482873 SLC1A4P43007 532 aa16.77■□□□□ 0.28
DDR1-244ENST00000482873 SEPT2Q15019 361 aa16.77■□□□□ 0.28
DDR1-244ENST00000482873 QRICH1Q2TAL8 776 aa16.77■□□□□ 0.28
DDR1-244ENST00000482873 UNC13DQ70J99 1090 aa16.77■□□□□ 0.28
DDR1-244ENST00000482873 NOC3LQ8WTT2 800 aaKnown RBP16.77■□□□□ 0.28
DDR1-244ENST00000482873 CUL5Q93034 780 aa16.77■□□□□ 0.28
DDR1-244ENST00000482873 CDK5RAP2Q96SN8 1893 aa16.77■□□□□ 0.28
DDR1-244ENST00000482873 A0A1W2PQJ5 194 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 ZSCAN5CA6NGD5 496 aaPredicted RBP16.77■□□□□ 0.27
DDR1-244ENST00000482873 TRAF5O00463 557 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 FAM153BP0C7A2 387 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 CRKP46108 304 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 FAM153CQ494X1 144 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 VWA3BQ502W6 1294 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 FIGNQ5HY92 759 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 CENPPQ6IPU0 288 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 C8orf74Q6P047 294 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 TMC4Q7Z404 712 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 TEKT1Q969V4 418 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 MS4A14Q96JA4 679 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 RNPC3Q96LT9 517 aaKnown RBP16.77■□□□□ 0.27
DDR1-244ENST00000482873 P2RX7Q99572 595 aaKnown RBP16.77■□□□□ 0.27
DDR1-244ENST00000482873 RIC8AQ9NPQ8 531 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 FAM153AQ9UHL3 310 aa16.77■□□□□ 0.27
DDR1-244ENST00000482873 IGKV6D-41A0A0C4DH26 115 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 ESYT3A0FGR9 886 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 LRRC53A6NM62 1247 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 ZBTB5O15062 677 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 GLI1P08151 1106 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 EIF4A3P38919 411 aaKnown RBP16.76■□□□□ 0.27
DDR1-244ENST00000482873 CARSP49589 748 aaKnown RBP16.76■□□□□ 0.27
DDR1-244ENST00000482873 GUCY1A3Q02108 690 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
DDR1-244ENST00000482873 TRPC5Q9UL62 973 aaPredicted RBP16.76■□□□□ 0.27
DDR1-244ENST00000482873 ZNF233A6NK53 670 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 MEFVO15553 781 aaPredicted RBP16.76■□□□□ 0.27
DDR1-244ENST00000482873 HLA-DOAP06340 250 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 MMP10P09238 476 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 HNRNPH3P31942 346 aaKnown RBP16.76■□□□□ 0.27
DDR1-244ENST00000482873 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.272e-6■■■□□ 15.4
DDR1-244ENST00000482873 B4GALNT4Q76KP1 1039 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 DNAAF5Q86Y56 855 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 IQCKQ8N0W5 287 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 CCDC43Q96MW1 224 aaKnown RBP16.76■□□□□ 0.27
DDR1-244ENST00000482873 TLR10Q9BXR5 811 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 NFU1Q9UMS0 254 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 ZNF831Q5JPB2 1677 aa16.76■□□□□ 0.27
DDR1-244ENST00000482873 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 ESYT2A0FGR8 921 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 POTEIP0CG38 1075 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 HOXA13P31271 388 aaPredicted RBP16.75■□□□□ 0.27
DDR1-244ENST00000482873 LSP1P33241 339 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 NOVP48745 357 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 SATB1Q01826 763 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 POTEGQ6S5H5 508 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 POTEEQ6S8J3 1075 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 OTUD6BQ8N6M0 293 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 AKR1B10O60218 316 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 TNFRSF8P28908 595 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 PAFAH1B1P43034 410 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 GFPT1Q06210 699 aaPredicted RBP16.75■□□□□ 0.27
DDR1-244ENST00000482873 COASYQ13057 564 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 PRR16Q569H4 304 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 FAM114A1Q8IWE2 563 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 CYP2W1Q8TAV3 490 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 ALS2CR12Q96Q35 445 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 PANK4Q9NVE7 773 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 ADAMTSL1Q8N6G6 1762 aa16.75■□□□□ 0.27
DDR1-244ENST00000482873 A6NNZ2 444 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 H0YHG0 523 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms