RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 SMARCAD1Q9H4L7 1026 aa20.87■□□□□ 0.93
SMIM4-204ENST00000482728 TBC1D22BQ9NU19 505 aa20.87■□□□□ 0.93
SMIM4-204ENST00000482728 GTF2IRD1Q9UHL9 959 aa20.87■□□□□ 0.93
SMIM4-204ENST00000482728 TCEAL9Q9UHQ7 104 aa20.87■□□□□ 0.93
SMIM4-204ENST00000482728 DDX39AO00148 427 aaKnown RBP20.86■□□□□ 0.93
SMIM4-204ENST00000482728 ST3GAL1Q11201 340 aa20.86■□□□□ 0.93
SMIM4-204ENST00000482728 PPIGQ13427 754 aaKnown RBP eCLIP20.86■□□□□ 0.93
SMIM4-204ENST00000482728 BFSP2Q13515 415 aa20.86■□□□□ 0.93
SMIM4-204ENST00000482728 TRIM50Q86XT4 487 aa20.86■□□□□ 0.93
SMIM4-204ENST00000482728 AZI2Q9H6S1 392 aa20.86■□□□□ 0.93
SMIM4-204ENST00000482728 RANBP2P49792 3224 aaKnown RBP20.86■□□□□ 0.93
SMIM4-204ENST00000482728 GNAT1P11488 350 aa20.85■□□□□ 0.93
SMIM4-204ENST00000482728 KRT2P35908 639 aa20.85■□□□□ 0.93
SMIM4-204ENST00000482728 FOSBP53539 338 aa20.85■□□□□ 0.93
SMIM4-204ENST00000482728 CCL23P55773 120 aa20.85■□□□□ 0.93
SMIM4-204ENST00000482728 ACTR2P61160 394 aa20.85■□□□□ 0.93
SMIM4-204ENST00000482728 HMGN5P82970 282 aaKnown RBP20.85■□□□□ 0.93
SMIM4-204ENST00000482728 INF2Q27J81 1249 aa20.85■□□□□ 0.93
SMIM4-204ENST00000482728 CCDC155Q8N6L0 562 aa20.85■□□□□ 0.93
SMIM4-204ENST00000482728 ERAP1Q9NZ08 941 aa20.85■□□□□ 0.93
SMIM4-204ENST00000482728 C17orf102A2RUQ5 167 aa20.84■□□□□ 0.93
SMIM4-204ENST00000482728 SMIM10L2AP0DMW4 78 aa20.84■□□□□ 0.93
SMIM4-204ENST00000482728 SMIM10L2BP0DMW5 78 aa20.84■□□□□ 0.93
SMIM4-204ENST00000482728 CSF2RAP15509 400 aa20.84■□□□□ 0.93
SMIM4-204ENST00000482728 MCM2P49736 904 aa20.84■□□□□ 0.93
SMIM4-204ENST00000482728 FAM184AQ8NB25 1140 aa20.84■□□□□ 0.93
SMIM4-204ENST00000482728 OXER1Q8TDS5 423 aa20.84■□□□□ 0.93
SMIM4-204ENST00000482728 LTBP2Q14767 1821 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 UMODL1Q5DID0 1318 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 CYP3A7-CYP3A51PA0A087WV96 503 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 DHX15O43143 795 aaKnown RBP20.83■□□□□ 0.93
SMIM4-204ENST00000482728 CYP3A7P24462 503 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 SAFBQ15424 915 aaKnown RBP eCLIP20.83■□□□□ 0.93
SMIM4-204ENST00000482728 SHHQ15465 462 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 LETM2Q2VYF4 491 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 KRT40Q6A162 431 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 PIK3AP1Q6ZUJ8 805 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 RPUSD2Q8IZ73 545 aaKnown RBP20.83■□□□□ 0.93
SMIM4-204ENST00000482728 TNPO1Q92973 898 aaKnown RBP20.83■□□□□ 0.93
SMIM4-204ENST00000482728 ATP6V0A1Q93050 837 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 RNPEPQ9H4A4 650 aa20.83■□□□□ 0.93
SMIM4-204ENST00000482728 KAT6AQ92794 2004 aa20.83■□□□□ 0.92
SMIM4-204ENST00000482728 PITPNM1O00562 1244 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 BACH1O14867 736 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 EDIL3O43854 480 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 LGR5O75473 907 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 MMP1P03956 469 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 MARK3P27448 753 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 STAT5BP51692 787 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 EPHB4P54760 987 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 ZNF200P98182 395 aaPredicted RBP20.82■□□□□ 0.92
SMIM4-204ENST00000482728 PTK7Q13308 1070 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 Q4G0T1 1027 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 MIS18BP1Q6P0N0 1132 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 MOXD1Q6UVY6 613 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 NEK8Q86SG6 692 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 CAGE1Q8TC20 777 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 LENG9Q96B70 501 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 C8orf76Q96K31 380 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 SETD4Q9NVD3 440 aa20.82■□□□□ 0.92
SMIM4-204ENST00000482728 EMSYQ7Z589 1322 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 MSH4O15457 936 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 GAS7O60861 476 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 ATG7O95352 703 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 TDP2O95551 362 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 CCNE2O96020 404 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 KRT76Q01546 638 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 NR5A1Q13285 461 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 C9orf50Q5SZB4 431 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 FAM160B1Q5W0V3 765 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 ZNF746Q6NUN9 644 aaPredicted RBP20.81■□□□□ 0.92
SMIM4-204ENST00000482728 PLPPR4Q7Z2D5 763 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 DIS3L2Q8IYB7 885 aaKnown RBP20.81■□□□□ 0.92
SMIM4-204ENST00000482728 SCLYQ96I15 445 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 TMX3Q96JJ7 454 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 RIT2Q99578 217 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 NAP1L4Q99733 375 aaKnown RBP20.81■□□□□ 0.92
SMIM4-204ENST00000482728 WNT8AQ9H1J5 351 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 IL23AQ9NPF7 189 aa20.81■□□□□ 0.92
SMIM4-204ENST00000482728 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
SMIM4-204ENST00000482728 TRIP12Q14669 1992 aaPredicted RBP20.81■□□□□ 0.92
SMIM4-204ENST00000482728 NRCAMQ92823 1304 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 BTBD18B2RXH4 712 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 ACRP10323 421 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 GCFC2P16383 781 aaKnown RBP20.8■□□□□ 0.92
SMIM4-204ENST00000482728 GUCY1B3Q02153 619 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 PPFIA1Q13136 1202 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 LRCH2Q5VUJ6 765 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 ABHD15Q6UXT9 468 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 SMAP1Q8IYB5 467 aaPredicted RBP20.8■□□□□ 0.92
SMIM4-204ENST00000482728 AFAP1L1Q8TED9 768 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 SLC5A5Q92911 643 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 CTAGE1Q96RT6 745 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 PCYT2Q99447 389 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 KIF3AQ9Y496 699 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 SAMM50Q9Y512 469 aa20.8■□□□□ 0.92
SMIM4-204ENST00000482728 MARCH6O60337 910 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 CCNT1O60563 726 aaKnown RBP20.79■□□□□ 0.92
SMIM4-204ENST00000482728 PSAPP07602 524 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 IQCF3P0C7M6 154 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms