RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 KRT71Q3SY84 523 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 PPP4R3AQ6IN85 833 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 TXNRD3Q86VQ6 643 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 SYN2Q92777 582 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-211ENST00000481804 GJA10Q969M2 543 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 NLRP3Q96P20 1036 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 ANKRD2Q9GZV1 360 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 PLCB1Q9NQ66 1216 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 ANKIB1Q9P2G1 1089 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 NOVA2Q9UNW9 492 aaKnown RBP15.72■□□□□ 0.11
CCDC78-211ENST00000481804 STRCQ7RTU9 1775 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 ITGB4P16144 1822 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 CHUKO15111 745 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 KIF4AO95239 1232 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 RASA1P20936 1047 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 ACTN3Q08043 901 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-211ENST00000481804 TCERG1LQ5VWI1 586 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 PEX26Q7Z412 305 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 YTHDF3Q7Z739 585 aaKnown RBP15.72■□□□□ 0.11
CCDC78-211ENST00000481804 SCLT1Q96NL6 688 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 FBXL5Q9UKA1 691 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 PGRMC1O00264 195 aaKnown RBP15.71■□□□□ 0.11
CCDC78-211ENST00000481804 SART1O43290 800 aaKnown RBP15.71■□□□□ 0.11
CCDC78-211ENST00000481804 ADAM9Q13443 819 aa15.71■□□□□ 0.11
CCDC78-211ENST00000481804 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.11
CCDC78-211ENST00000481804 DPH5Q9H2P9 285 aa15.71■□□□□ 0.11
CCDC78-211ENST00000481804 GNA14O95837 355 aa15.71■□□□□ 0.11
CCDC78-211ENST00000481804 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
CCDC78-211ENST00000481804 CACNA2D3Q8IZS8 1091 aa15.71■□□□□ 0.11
CCDC78-211ENST00000481804 A0A1B0GUL6 1792 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.7■□□□□ 0.1
CCDC78-211ENST00000481804 SF3A3Q12874 501 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCDC78-211ENST00000481804 GOPCQ9HD26 462 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 AMACRQ9UHK6 382 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 FAM170AA1A519 330 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 CETN3O15182 167 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 DAPK3O43293 454 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 ACTN1P12814 892 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
CCDC78-211ENST00000481804 LRIG3Q6UXM1 1119 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 PBKQ96KB5 322 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 MTMR9Q96QG7 549 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 SLC40A1Q9NP59 571 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 NOC2LQ9Y3T9 749 aaKnown RBP15.7■□□□□ 0.1
CCDC78-211ENST00000481804 USP17L5A8MUK1 530 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 SMTNP53814 917 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 EIF6P56537 245 aaKnown RBP15.7■□□□□ 0.1
CCDC78-211ENST00000481804 GSTO1P78417 241 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 PTK2Q05397 1052 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 MTMR3Q13615 1198 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 DCAF17Q5H9S7 520 aaPredicted RBP15.7■□□□□ 0.1
CCDC78-211ENST00000481804 VPS36Q86VN1 386 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 CEP63Q96MT8 703 aa15.7■□□□□ 0.1
CCDC78-211ENST00000481804 DLEC1Q9Y238 1755 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 NF2P35240 595 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 CDK8P49336 464 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 MAGOHP61326 146 aaKnown RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 PPP2R2AP63151 447 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 ZNF844Q08AG5 666 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 KCNH2Q12809 1159 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 BIRC3Q13489 604 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 ALKBH5Q6P6C2 394 aaKnown RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 ARHGAP27Q6ZUM4 889 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 GPBP1Q86WP2 473 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 MAGOHBQ96A72 148 aaKnown RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 CEP95Q96GE4 821 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 GPCPD1Q9NPB8 672 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 DDX25Q9UHL0 483 aaKnown RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 CLSTN1O94985 981 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 USP11P51784 963 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 DHX9Q08211 1270 aaKnown RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 ORC2Q13416 577 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 UBE2SQ16763 222 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 NBPF5PQ86XG9 351 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 CCDC26Q8TAB7 109 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 ACTR5Q9H9F9 607 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 DDX20Q9UHI6 824 aaKnown RBP15.69■□□□□ 0.1
CCDC78-211ENST00000481804 PCDHA12Q9UN75 941 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 KIAA1024Q9UPX6 916 aa15.69■□□□□ 0.1
CCDC78-211ENST00000481804 TAF1P21675 1872 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 NPHP3-ACAD11A0A0J9YXS1 232 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 E9PMD0 336 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 NR2F2P24468 414 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 PDIA5Q14554 519 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 GKAP1Q5VSY0 366 aaPredicted RBP15.68■□□□□ 0.1
CCDC78-211ENST00000481804 DAAM2Q86T65 1068 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 TRIM59Q8IWR1 403 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 WDR66Q8TBY9 1149 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 FGFBP2Q9BYJ0 223 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 MYH1P12882 1939 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 COL4A1P02462 1669 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 RAD21O60216 631 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 FLOT1O75955 427 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 LDHCP07864 332 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 SNCBQ16143 134 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 TEX11Q8IYF3 940 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 EMILIN3Q9NT22 766 aa15.68■□□□□ 0.1
CCDC78-211ENST00000481804 UTP11Q9Y3A2 253 aaKnown RBP15.68■□□□□ 0.1
CCDC78-211ENST00000481804 DDB1Q16531 1140 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms