RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 ARHGAP4P98171 946 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 SART3Q15020 963 aaKnown RBP15.32■□□□□ 0.04
PTPN7-212ENST00000480836 GNPTABQ3T906 1256 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 EPC2Q52LR7 807 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 CREB3L3Q68CJ9 461 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 TCEANC2Q96MN5 208 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 SENP7Q9BQF6 1050 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 EHMT1Q9H9B1 1298 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 LMCD1Q9NZU5 365 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 BDP1A6H8Y1 2624 aa15.32■□□□□ 0.04
PTPN7-212ENST00000480836 AMHP03971 560 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 MARK3P27448 753 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 MGAT3Q09327 533 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 TRAF1Q13077 416 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 AAK1Q2M2I8 961 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 RTN4RL1Q86UN2 441 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-212ENST00000480836 IL27Q8NEV9 243 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 CTCFLQ8NI51 663 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-212ENST00000480836 PGBD1Q96JS3 809 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 ESYT1Q9BSJ8 1104 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 AGO3Q9H9G7 860 aaKnown RBP15.31■□□□□ 0.04
PTPN7-212ENST00000480836 BRPF3Q9ULD4 1205 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 EMSYQ7Z589 1322 aa15.31■□□□□ 0.04
PTPN7-212ENST00000480836 EFCAB14O75071 495 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 IL9P15248 144 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 MCM5P33992 734 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 LIFRP42702 1097 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 FUT2Q10981 343 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 COL4A6Q14031 1691 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 LPIN1Q14693 890 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 TMTC3Q6ZXV5 915 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 RASEFQ8IZ41 740 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 FANCBQ8NB91 859 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 FBXO22Q8NEZ5 403 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 LINC01599Q8WXQ3 324 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 SEPT8Q92599 483 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 LRFN3Q9BTN0 628 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 UBE2ZQ9H832 354 aaPredicted RBP15.3■□□□□ 0.04
PTPN7-212ENST00000480836 PCDHA6Q9UN73 950 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 PCDHA8Q9Y5H6 950 aa15.3■□□□□ 0.04
PTPN7-212ENST00000480836 ENPP3O14638 875 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 ARP10275 920 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 GHRP10912 638 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 KCNA5P22460 613 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 ADCK5Q3MIX3 580 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 CASC1Q6TDU7 716 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 NFXL1Q6ZNB6 911 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 TMEM192Q8IY95 271 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 DNAJB3Q8WWF6 145 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 SEPT1Q8WYJ6 367 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 GPRASP2Q96D09 838 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 TMEM87BQ96K49 555 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 MTA3Q9BTC8 594 aa15.29■□□□□ 0.04
PTPN7-212ENST00000480836 RC3H2Q9HBD1 1191 aaKnown RBP15.29■□□□□ 0.04
PTPN7-212ENST00000480836 FAM217BQ9NTX9 383 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-212ENST00000480836 NRCAMQ92823 1304 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 MBLAC1A4D2B0 266 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-212ENST00000480836 CCDC69A6NI79 296 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 H3BNC9 293 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 KIF5BP33176 963 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
PTPN7-212ENST00000480836 GPM6BQ13491 265 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 WWC2Q6AWC2 1192 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 XRRA1Q6P2D8 792 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 NLRX1Q86UT6 975 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 CRIPAKQ8N1N5 446 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 TRAPPC12Q8WVT3 735 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 CUL5Q93034 780 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 LZTS2Q9BRK4 669 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 IFIH1Q9BYX4 1025 aaKnown RBP15.28■□□□□ 0.04
PTPN7-212ENST00000480836 JADE2Q9NQC1 790 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 TMEM260Q9NX78 707 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 MYO7AQ13402 2215 aa15.28■□□□□ 0.04
PTPN7-212ENST00000480836 ATG2AQ2TAZ0 1938 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 FAM86C2PA6NEL3 165 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-212ENST00000480836 CAND2O75155 1236 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 INSRRP14616 1297 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 LTBRP36941 435 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 PPFIA1Q13136 1202 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 ITGB3BPQ13352 177 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-212ENST00000480836 CAMK1Q14012 370 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 GRIK4Q16099 956 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 LEXMQ3ZCV2 418 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 TCEAL5Q5H9L2 206 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 SGMS1Q86VZ5 419 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 NEK9Q8TD19 979 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 MRPL38Q96DV4 380 aaKnown RBP15.27■□□□□ 0.04
PTPN7-212ENST00000480836 UIMC1Q96RL1 719 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 YME1L1Q96TA2 773 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.04
PTPN7-212ENST00000480836 SEC63Q9UGP8 760 aaKnown RBP15.27■□□□□ 0.04
PTPN7-212ENST00000480836 CNTNAP5Q8WYK1 1306 aa15.26■□□□□ 0.03
PTPN7-212ENST00000480836 POTEB3A0JP26 581 aa15.26■□□□□ 0.03
PTPN7-212ENST00000480836 GRM6O15303 877 aa15.26■□□□□ 0.03
PTPN7-212ENST00000480836 GNAT1P11488 350 aa15.26■□□□□ 0.03
PTPN7-212ENST00000480836 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■□□□□ 10.7
PTPN7-212ENST00000480836 GNAQP50148 359 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms