RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 DDX25Q9UHL0 483 aaKnown RBP13.87□□□□□ -0.19
TRA2B-212ENST00000480461 A6NJR5 290 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 IPO5O00410 1097 aaKnown RBP13.86□□□□□ -0.19
TRA2B-212ENST00000480461 BRD1O95696 1058 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 CCNE2O96020 404 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 GH1P01241 217 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
TRA2B-212ENST00000480461 MCM7P33993 719 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 ANP32AP39687 249 aaKnown RBP13.86□□□□□ -0.19
TRA2B-212ENST00000480461 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
TRA2B-212ENST00000480461 SNX17Q15036 470 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 DHX37Q8IY37 1157 aaKnown RBP13.86□□□□□ -0.19
TRA2B-212ENST00000480461 EMID1Q96A84 441 aaPredicted RBP13.86□□□□□ -0.19
TRA2B-212ENST00000480461 CHAMP1Q96JM3 812 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 MTMR9Q96QG7 549 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 ZNF577Q9BSK1 485 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 PDLIM7Q9NR12 457 aa13.86□□□□□ -0.19
TRA2B-212ENST00000480461 GSTTP1A0A1W2PQM5 241 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 NKRFO15226 690 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRA2B-212ENST00000480461 PSMD10O75832 226 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 TRAPPC10P48553 1259 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 LAMC2Q13753 1193 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 KCNA10Q16322 511 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 IL17AQ16552 155 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 TRIM60Q495X7 471 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 TTC38Q5R3I4 469 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 B3GNT9Q6UX72 402 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 SLC39A5Q6ZMH5 540 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 OR6J1Q8NGC5 347 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 CDHR1Q96JP9 859 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 FTOQ9C0B1 505 aaKnown RBP eCLIP13.85□□□□□ -0.194e-15■□□□□ 8.7
TRA2B-212ENST00000480461 AP5M1Q9H0R1 490 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.85□□□□□ -0.19
TRA2B-212ENST00000480461 KIAA1217Q5T5P2 1943 aa13.85□□□□□ -0.19
TRA2B-212ENST00000480461 TRIM43BA6NCK2 446 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 C6orf222P0C671 652 aaPredicted RBP13.84□□□□□ -0.19
TRA2B-212ENST00000480461 GCFC2P16383 781 aaKnown RBP13.84□□□□□ -0.19
TRA2B-212ENST00000480461 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
TRA2B-212ENST00000480461 NEDD9Q14511 834 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 FSCN1Q16658 493 aaKnown RBP13.84□□□□□ -0.19
TRA2B-212ENST00000480461 METTL7BQ6UX53 244 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 BRAPQ7Z569 592 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 SH3RF1Q7Z6J0 888 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 TRIM43Q96BQ3 446 aaPredicted RBP13.84□□□□□ -0.19
TRA2B-212ENST00000480461 SPATA33Q96N06 139 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 PCYT2Q99447 389 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 GPR20Q99678 358 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 CLIC4Q9Y696 253 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 NFASCO94856 1347 aa13.84□□□□□ -0.19
TRA2B-212ENST00000480461 KBTBD13C9JR72 458 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 DDX39AO00148 427 aaKnown RBP13.83□□□□□ -0.2
TRA2B-212ENST00000480461 ATG7O95352 703 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 F13A1P00488 732 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-212ENST00000480461 MMP3P08254 477 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 HOXD8P13378 290 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-212ENST00000480461 PLA2G5P39877 138 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 SETQ01105 290 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-212ENST00000480461 SP4Q02446 784 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 SPIRE1Q08AE8 756 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 PTGDRQ13258 359 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 GRIN2CQ14957 1233 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 RILPL1Q5EBL4 403 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 ARRDC4Q8NCT1 418 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 PPTC7Q8NI37 304 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 KAT2BQ92831 832 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 RNPC3Q96LT9 517 aaKnown RBP13.83□□□□□ -0.2
TRA2B-212ENST00000480461 RIT2Q99578 217 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-212ENST00000480461 TFIP11Q9UBB9 837 aaKnown RBP13.83□□□□□ -0.2
TRA2B-212ENST00000480461 VAV3Q9UKW4 847 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 GRIN2DO15399 1336 aa13.83□□□□□ -0.2
TRA2B-212ENST00000480461 EML1O00423 815 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 PPFIA4O75335 1185 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 ASGR1P07306 291 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 ACLYP53396 1101 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 ACTR2P61160 394 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 PURAQ00577 322 aaKnown RBP13.82□□□□□ -0.2
TRA2B-212ENST00000480461 PTPAQ15257 358 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-212ENST00000480461 CXCL17Q6UXB2 119 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 ABHD15Q6UXT9 468 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-212ENST00000480461 RNF180Q86T96 592 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-212ENST00000480461 PPP1R13LQ8WUF5 828 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 FAM20AQ96MK3 541 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 NAP1L4Q99733 375 aaKnown RBP13.82□□□□□ -0.2
TRA2B-212ENST00000480461 C16orf70Q9BSU1 422 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 UNC45AQ9H3U1 944 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 JPH1Q9HDC5 661 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-212ENST00000480461 TBC1D22BQ9NU19 505 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 SLC9A2Q9UBY0 812 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-212ENST00000480461 NOL7Q9UMY1 257 aaKnown RBP13.82□□□□□ -0.2
TRA2B-212ENST00000480461 PHF24Q9UPV7 400 aa13.82□□□□□ -0.2
TRA2B-212ENST00000480461 IGKV6D-21A0A0A0MT36 114 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms