RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 CUEDC2Q9H467 287 aa18.92■□□□□ 0.62
SCAMP3-207ENST00000480219 TUFT1Q9NNX1 390 aa18.92■□□□□ 0.62
SCAMP3-207ENST00000480219 PDGFCQ9NRA1 345 aa18.92■□□□□ 0.62
SCAMP3-207ENST00000480219 SLC9A2Q9UBY0 812 aa18.92■□□□□ 0.62
SCAMP3-207ENST00000480219 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
SCAMP3-207ENST00000480219 IGKV6D-21A0A0A0MT36 114 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 POLR2DO15514 142 aaKnown RBP18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 ACTN4O43707 911 aaKnown RBP18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 LYPLA2O95372 231 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 CYP2C19P33261 490 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 GRB10Q13322 594 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 KARSQ15046 597 aaKnown RBP18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 LY6KQ17RY6 165 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 DUSP28Q4G0W2 176 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 NAALADL2Q58DX5 795 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 ABHD15Q6UXT9 468 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 UIMC1Q96RL1 719 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 NT5C3AQ9H0P0 336 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 BCAS3Q9H6U6 928 aa18.91■□□□□ 0.62
SCAMP3-207ENST00000480219 MED24O75448 989 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 ECM2O94769 699 aaPredicted RBP18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 SLITRK3O94933 977 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 GGPS1O95749 300 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 SLFN14P0C7P3 912 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 TXNP10599 105 aaKnown RBP18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 CYBAP13498 195 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 ACTR2P61160 394 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 ARHGAP1Q07960 439 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 MAP3K21Q5TCX8 1036 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 MFSD14CQ5VZR4 134 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 PDXDC2PQ6P474 469 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 CYFIP1Q7L576 1253 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 MIER3Q7Z3K6 550 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 CATSPER3Q86XQ3 398 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 IQUBQ8NA54 791 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 LRRC15Q8TF66 581 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 CALML4Q96GE6 196 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 MAGEF1Q9HAY2 307 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 PKD2L1Q9P0L9 805 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 STK17AQ9UEE5 414 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 TCEAL9Q9UHQ7 104 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 PCDHA10Q9Y5I2 948 aa18.9■□□□□ 0.62
SCAMP3-207ENST00000480219 KINO60870 393 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 P4HBP07237 508 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 HOXD8P13378 290 aaPredicted RBP18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 PLCG1P19174 1290 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 ADCYAP1R1P41586 468 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 LAMC2Q13753 1193 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 ECM1Q16610 540 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 CCDC144BQ3MJ40 725 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 LONRF3Q496Y0 759 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 KRBA2Q6ZNG9 492 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 SH3RF1Q7Z6J0 888 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 CLSTN2Q9H4D0 955 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 GNEQ9Y223 722 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 Q9Y3F1 56 aa18.89■□□□□ 0.61
SCAMP3-207ENST00000480219 GSTTP1A0A1W2PQM5 241 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 DDX39AO00148 427 aaKnown RBP18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 CHMP2AO43633 222 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 GH1P01241 217 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 SUPT20HL2P0C7V6 817 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 SMPD1P17405 629 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 CCT6AP40227 531 aaKnown RBP18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 NKX3-2P78367 333 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 TMEM63BQ5T3F8 832 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 RRAGBQ5VZM2 374 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 KANK3Q6NY19 840 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 RBM43Q6ZSC3 357 aaKnown RBP18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 BLOC1S4Q9NUP1 217 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 TMEM63CQ9P1W3 806 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 ZHX1Q9UKY1 873 aaPredicted RBP18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 DOCK5Q9H7D0 1870 aa18.88■□□□□ 0.61
SCAMP3-207ENST00000480219 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 POTEB3A0JP26 581 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 POTEFA5A3E0 1075 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 ADCY6O43306 1168 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 ADCY3O60266 1144 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 LGR5O75473 907 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 HMGCRP04035 888 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 PSAPP07602 524 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 QARSP47897 775 aaKnown RBP18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 MDM2Q00987 491 aaPredicted RBP18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 CCDC183Q5T5S1 534 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 POTEBQ6S5H4 581 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 DHX37Q8IY37 1157 aaKnown RBP18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 C4orf19Q8IY42 314 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 PDILTQ8N807 584 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 SLAIN1Q8ND83 568 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 TRPV1Q8NER1 839 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 AFAP1L1Q8TED9 768 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 SEPT1Q8WYJ6 367 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 SYAP1Q96A49 352 aaPredicted RBP18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 DYDC2Q96IM9 177 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 GPR20Q99678 358 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 ZSWIM4Q9H7M6 989 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 MLXIPQ9HAP2 919 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 KBTBD4Q9NVX7 518 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 RGL1Q9NZL6 768 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 SERTAD1Q9UHV2 236 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 FAM184BQ9ULE4 1060 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms