RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 SEPT4O43236 478 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 ADCY6O43306 1168 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 FIBPO43427 364 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 PSMD10O75832 226 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 INHAP05111 366 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 KCNA2P16389 499 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 SMPD1P17405 629 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 MCM7P33993 719 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 ADCYAP1R1P41586 468 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 NKX3-2P78367 333 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 SETQ01105 290 aaPredicted RBP10.86□□□□□ -0.67
CD46-214ENST00000480003 PTGDRQ13258 359 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 MTMR1Q13613 665 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 TTLL4Q14679 1199 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 SLC39A14Q15043 492 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 SF3A1Q15459 793 aaKnown RBP10.86□□□□□ -0.67
CD46-214ENST00000480003 DUSP28Q4G0W2 176 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 ANO1Q5XXA6 986 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 B3GNT9Q6UX72 402 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 SLC5A5Q92911 643 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 POLR3EQ9NVU0 708 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 RCOR1Q9UKL0 485 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 ATP6V1DQ9Y5K8 247 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 PLXNA1Q9UIW2 1896 aa10.86□□□□□ -0.67
CD46-214ENST00000480003 MCM3APO60318 1980 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 IPO5O00410 1097 aaKnown RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 NKRFO15226 690 aaKnown RBP eCLIP10.85□□□□□ -0.67
CD46-214ENST00000480003 TXNP10599 105 aaKnown RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 CCND3P30281 292 aaPredicted RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 PRPHP41219 470 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 ATP2C1P98194 919 aaPredicted RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 TNFAIP2Q03169 654 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 DNM1Q05193 864 aaKnown RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 ITGB3BPQ13352 177 aaPredicted RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 NEDD9Q14511 834 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 IL17AQ16552 155 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 CELF3Q5SZQ8 465 aaKnown RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 CLEC17AQ6ZS10 378 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 LINC00301Q8NCQ3 95 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 SH3TC2Q8TF17 1288 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 COPS5Q92905 334 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 ARMC5Q96C12 935 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 RIT2Q99578 217 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 FTOQ9C0B1 505 aaKnown RBP eCLIP10.85□□□□□ -0.67
CD46-214ENST00000480003 HMX1Q9NP08 348 aaPredicted RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 TBC1D22BQ9NU19 505 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 ZHX1Q9UKY1 873 aaPredicted RBP10.85□□□□□ -0.67
CD46-214ENST00000480003 MRVI1Q9Y6F6 885 aa10.85□□□□□ -0.67
CD46-214ENST00000480003 LAD1O00515 517 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 CTAGE5O15320 804 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 NEMFO60524 1076 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 DUSP11O75319 330 aaKnown RBP10.84□□□□□ -0.67
CD46-214ENST00000480003 ATG7O95352 703 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 BAG4O95429 457 aaKnown RBP10.84□□□□□ -0.67
CD46-214ENST00000480003 BMP15O95972 392 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 AKR1A1P14550 325 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 UBA1P22314 1058 aaKnown RBP10.84□□□□□ -0.67
CD46-214ENST00000480003 PDIA5Q14554 519 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 MTFR1Q15390 333 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 SLC9C1Q4G0N8 1177 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 ARL6IP4Q66PJ3 421 aaKnown RBP10.84□□□□□ -0.67
CD46-214ENST00000480003 SLFN12Q8IYM2 578 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 TNPO1Q92973 898 aaKnown RBP10.84□□□□□ -0.67
CD46-214ENST00000480003 GJA10Q969M2 543 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 EMID1Q96A84 441 aaPredicted RBP10.84□□□□□ -0.67
CD46-214ENST00000480003 ZNF333Q96JL9 665 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 UIMC1Q96RL1 719 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 ZNF577Q9BSK1 485 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 RABGEF1Q9UJ41 708 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 CFAP45Q9UL16 551 aa10.84□□□□□ -0.67
CD46-214ENST00000480003 RBBP6Q7Z6E9 1792 aaKnown RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 DYNC1LI2O43237 492 aaPredicted RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 PPP6R2O75170 966 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 FARP2O94887 1054 aaPredicted RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 YEATS4O95619 227 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 GH1P01241 217 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 PTGS1P23219 599 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 TXKP42681 527 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 GJA9P57773 515 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 ARHGAP1Q07960 439 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 SPIRE1Q08AE8 756 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 LAMC2Q13753 1193 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 CALCRLQ16602 461 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 METTL7BQ6UX53 244 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 CYFIP1Q7L576 1253 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 GIMAP8Q8ND71 665 aaPredicted RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 KLHDC9Q8NEP7 349 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 UNC93B1Q9H1C4 597 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 UPF3AQ9H1J1 476 aaKnown RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 PAK6Q9NQU5 681 aaPredicted RBP10.83□□□□□ -0.68
CD46-214ENST00000480003 PCDHA12Q9UN75 941 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 CEP131Q9UPN4 1083 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 TELO2Q9Y4R8 837 aa10.83□□□□□ -0.68
CD46-214ENST00000480003 SRPRBQ9Y5M8 271 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms