RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 SPO11Q9Y5K1 396 aa7.34□□□□□ -1.23
BRAF-203ENST00000479537 PRAMEF25A6NGN4 478 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 EFEMP2O95967 443 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 RNASE1P07998 156 aaKnown RBP7.33□□□□□ -1.24
BRAF-203ENST00000479537 ZBTB48P10074 688 aaPredicted RBP7.33□□□□□ -1.24
BRAF-203ENST00000479537 GLI4P10075 376 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 PNLIPP16233 465 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 LSP1P33241 339 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 TUSC3Q13454 348 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 ABCB5Q2M3G0 1257 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 RGL3Q3MIN7 710 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 EMC4Q5J8M3 183 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 BTBD8Q5XKL5 378 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 CYP4F22Q6NT55 531 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.33□□□□□ -1.24
BRAF-203ENST00000479537 RAVER1Q8IY67 606 aaKnown RBP7.33□□□□□ -1.24
BRAF-203ENST00000479537 CLRN3Q8NCR9 226 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 ELF4Q99607 663 aaPredicted RBP7.33□□□□□ -1.24
BRAF-203ENST00000479537 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 PALD1Q9ULE6 856 aa7.33□□□□□ -1.24
BRAF-203ENST00000479537 NOC2LQ9Y3T9 749 aaKnown RBP7.33□□□□□ -1.24
BRAF-203ENST00000479537 ZC3H12DA2A288 527 aaKnown RBP7.32□□□□□ -1.24
BRAF-203ENST00000479537 F8W031 263 aaPredicted RBP7.32□□□□□ -1.24
BRAF-203ENST00000479537 TGM5O43548 720 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 CLASP2O75122 1294 aaKnown RBP7.32□□□□□ -1.24
BRAF-203ENST00000479537 MT-CO1P00395 513 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 LTFP02788 710 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 MYBL2P10244 700 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 YBX3P16989 372 aaKnown RBP eCLIP7.32□□□□□ -1.24
BRAF-203ENST00000479537 SNX17Q15036 470 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 PPP2R5AQ15172 486 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 ZNF792Q3KQV3 632 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 NFXL1Q6ZNB6 911 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 MILR1Q7Z6M3 343 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 WDR75Q8IWA0 830 aaKnown RBP7.32□□□□□ -1.24
BRAF-203ENST00000479537 TRIM48Q8IWZ4 208 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 ABHD4Q8TB40 342 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 PHOSPHO1Q8TCT1 267 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 PEX11GQ96HA9 241 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 VTA1Q9NP79 307 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 ACSS2Q9NR19 701 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 KCNH7Q9NS40 1196 aa7.32□□□□□ -1.24
BRAF-203ENST00000479537 NUDT19A8MXV4 375 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 DVL2O14641 736 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 GABRDO14764 452 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 FBXO21O94952 628 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 DBHP09172 617 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 PTPN1P18031 435 aaKnown RBP7.31□□□□□ -1.24
BRAF-203ENST00000479537 SDHBP21912 280 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 CCND1P24385 295 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 GJA4P35212 333 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 GRIN1Q05586 938 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 MCL1Q07820 350 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 PTPN21Q16825 1174 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 ARTNQ5T4W7 220 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 CCDC181Q5TID7 509 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 CHMP4CQ96CF2 233 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 MENTQ9BUN1 341 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 RNF32Q9H0A6 362 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 ZFP64Q9NPA5 681 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 C14orf119Q9NWQ9 140 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 ASH2LQ9UBL3 628 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 CTNND2Q9UQB3 1225 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 ZNF652Q9Y2D9 606 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 B3GALT1Q9Y5Z6 326 aa7.31□□□□□ -1.24
BRAF-203ENST00000479537 SGSM2O43147 1006 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 BUB1BO60566 1050 aaPredicted RBP7.3□□□□□ -1.24
BRAF-203ENST00000479537 TADA3O75528 432 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 CYBBP04839 570 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 CYP17A1P05093 508 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 PTX3P26022 381 aaPredicted RBP7.3□□□□□ -1.24
BRAF-203ENST00000479537 IARSP41252 1262 aaKnown RBP7.3□□□□□ -1.24
BRAF-203ENST00000479537 SCAND1P57086 179 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 TERF2Q15554 542 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 ADGRF1Q5T601 910 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 CC2D1AQ6P1N0 951 aaPredicted RBP7.3□□□□□ -1.24
BRAF-203ENST00000479537 PAQR3Q6TCH7 311 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 ERCC4Q92889 916 aaPredicted RBP7.3□□□□□ -1.24
BRAF-203ENST00000479537 HOOK2Q96ED9 719 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 TNFRSF12AQ9NP84 129 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 SPEF1Q9Y4P9 236 aa7.3□□□□□ -1.24
BRAF-203ENST00000479537 SHTN1A0MZ66 631 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 SRGAP3O43295 1099 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 ADAMTS4O75173 837 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 MPOP05164 745 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 CD40P25942 277 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 AFMP43652 599 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 RAB27AP51159 221 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 KLF1Q13351 362 aaPredicted RBP7.29□□□□□ -1.24
BRAF-203ENST00000479537 RAB3GAP1Q15042 981 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 ZZZ3Q8IYH5 903 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 ZNF610Q8N9Z0 462 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 DLG3Q92796 817 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 MS4A5Q9H3V2 200 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 TELO2Q9Y4R8 837 aa7.29□□□□□ -1.24
BRAF-203ENST00000479537 TNKSO95271 1327 aa7.28□□□□□ -1.24
BRAF-203ENST00000479537 TCRBV5S2A0A599 114 aa7.28□□□□□ -1.24
BRAF-203ENST00000479537 FAM90A27PA6NNH2 459 aa7.28□□□□□ -1.24
BRAF-203ENST00000479537 GOLGA8AA7E2F4 631 aa7.28□□□□□ -1.24
BRAF-203ENST00000479537 GOLGA8BA8MQT2 603 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms