RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 JAKMIP1Q96N16 626 aaKnown RBP19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 ZBED2Q9BTP6 218 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 UBIAD1Q9Y5Z9 338 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 NLRC5Q86WI3 1866 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 GSTTP1A0A1W2PQM5 241 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 RSPH10B2B2RC85 870 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 STXBP3O00186 592 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 BAIAP3O94812 1187 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 RSPH10BP0C881 870 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 ADD1P35611 737 aaKnown RBP19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 RUFY4Q6ZNE9 571 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 LMBR1Q8WVP7 490 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 USP26Q9BXU7 913 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 SNX14Q9Y5W7 946 aa19.94■□□□□ 0.78
ECHDC1-216ENST00000479525 HOXC8P31273 242 aa19.93■□□□□ 0.78
ECHDC1-216ENST00000479525 FGD1P98174 961 aa19.93■□□□□ 0.78
ECHDC1-216ENST00000479525 MTMR1Q13613 665 aa19.93■□□□□ 0.78
ECHDC1-216ENST00000479525 PHOSPHO2Q8TCD6 241 aa19.93■□□□□ 0.78
ECHDC1-216ENST00000479525 GDPD5Q8WTR4 605 aa19.93■□□□□ 0.78
ECHDC1-216ENST00000479525 RBM28Q9NW13 759 aaKnown RBP19.93■□□□□ 0.78
ECHDC1-216ENST00000479525 KIF28PB7ZC32 967 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 DDX39AO00148 427 aaKnown RBP19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 LGR5O75473 907 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 ARP10275 920 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 IGBP1P78318 339 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 SKIV2LQ15477 1246 aaKnown RBP19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 MYOCDQ8IZQ8 938 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 BRF1Q92994 677 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 GPRASP2Q96D09 838 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 SENP7Q9BQF6 1050 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 ANO3Q9BYT9 981 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 WDR81Q562E7 1941 aa19.92■□□□□ 0.78
ECHDC1-216ENST00000479525 SMCO2A6NFE2 343 aa19.91■□□□□ 0.78
ECHDC1-216ENST00000479525 ADCY7P51828 1080 aa19.91■□□□□ 0.78
ECHDC1-216ENST00000479525 TFF2Q03403 129 aa19.91■□□□□ 0.78
ECHDC1-216ENST00000479525 IKBKEQ14164 716 aa19.91■□□□□ 0.78
ECHDC1-216ENST00000479525 JAKMIP3Q5VZ66 844 aa19.91■□□□□ 0.78
ECHDC1-216ENST00000479525 LARP6Q9BRS8 491 aaKnown RBP19.91■□□□□ 0.78
ECHDC1-216ENST00000479525 JADE2Q9NQC1 790 aa19.91■□□□□ 0.78
ECHDC1-216ENST00000479525 ZNF215Q9UL58 517 aaPredicted RBP19.91■□□□□ 0.78
ECHDC1-216ENST00000479525 UPP2O95045 317 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 METAP2P50579 478 aaKnown RBP eCLIP19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 GRB10Q13322 594 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 TSGA10IPQ3SY00 556 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 XRRA1Q6P2D8 792 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 TRAPPC12Q8WVT3 735 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 GLG1Q92896 1179 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 PCYT2Q99447 389 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 RIC8AQ9NPQ8 531 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 THEGQ9P2T0 379 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 MTCH2Q9Y6C9 303 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 EVPLQ92817 2033 aa19.9■□□□□ 0.78
ECHDC1-216ENST00000479525 ATG2AQ2TAZ0 1938 aa19.89■□□□□ 0.78
ECHDC1-216ENST00000479525 ABHD14A-ACY1A0A1B0GW23 586 aa19.89■□□□□ 0.77
ECHDC1-216ENST00000479525 GJB5O95377 273 aa19.89■□□□□ 0.77
ECHDC1-216ENST00000479525 KRT32Q14532 448 aa19.89■□□□□ 0.77
ECHDC1-216ENST00000479525 SEPT1Q8WYJ6 367 aa19.89■□□□□ 0.77
ECHDC1-216ENST00000479525 PHKBQ93100 1093 aa19.89■□□□□ 0.77
ECHDC1-216ENST00000479525 MXRA8Q9BRK3 442 aa19.89■□□□□ 0.77
ECHDC1-216ENST00000479525 HSPA4P34932 840 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 ADAM17P78536 824 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 PPFIA1Q13136 1202 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 GRIK4Q16099 956 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 PLEKHG4Q58EX7 1191 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 BLOC1S2Q6QNY1 142 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 RASGRP4Q8TDF6 673 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 KCNH7Q9NS40 1196 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 BARHL2Q9NY43 387 aa19.88■□□□□ 0.77
ECHDC1-216ENST00000479525 MYH9P35579 1960 aaKnown RBP19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 LINC01553A4QN01 128 aa19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 LPXNO60711 386 aa19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 DTNBO60941 627 aa19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 PARNO95453 639 aaKnown RBP19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 GHRP10912 638 aa19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 ITGB3BPQ13352 177 aaPredicted RBP19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 TJAP1Q5JTD0 557 aa19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 DNAJB3Q8WWF6 145 aa19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 NECAB3Q96P71 396 aaPredicted RBP19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 C17orf80Q9BSJ5 609 aa19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 NCOA5Q9HCD5 579 aaKnown RBP19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 JPH1Q9HDC5 661 aaPredicted RBP19.87■□□□□ 0.77
ECHDC1-216ENST00000479525 CHRNA1P02708 482 aa19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 CCT2P78371 535 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 TMEM62Q0P6H9 643 aa19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 GIMAP8Q8ND71 665 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 KCNB2Q92953 911 aa19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 CDHR1Q96JP9 859 aa19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 FAM49AQ9H0Q0 323 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 EHMT1Q9H9B1 1298 aa19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 SLC9A2Q9UBY0 812 aa19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 KIAA1671Q9BY89 1806 aa19.86■□□□□ 0.77
ECHDC1-216ENST00000479525 EMSYQ7Z589 1322 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 GTPBP6O43824 516 aaPredicted RBP19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 GNAT1P11488 350 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 RPS6KB1P23443 525 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 ZNF76P36508 570 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 CLK2P49760 499 aaKnown RBP19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 KCNQ1P51787 676 aa19.85■□□□□ 0.77
ECHDC1-216ENST00000479525 MKRN4PQ13434 485 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms