RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 FOXO4P98177 505 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 GRIN1Q05586 938 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 SSPNQ14714 243 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 ARHGAP44Q17R89 818 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 PAN2Q504Q3 1202 aaKnown RBP7.78□□□□□ -1.16
CCDC58-204ENST00000479414 CNNM4Q6P4Q7 775 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 TEPPQ6URK8 271 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 CD300LDQ6UXZ3 194 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 KIF18BQ86Y91 864 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 C2orf69Q8N8R5 385 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 SMARCC2Q8TAQ2 1214 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 MTFR1LQ9H019 292 aa7.78□□□□□ -1.16
CCDC58-204ENST00000479414 SLC12A8A0AV02 714 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 FAM90A27PA6NNH2 459 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 ACOT7O00154 380 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 TRAF5O00463 557 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 MYCLP1P12525 358 aaPredicted RBP7.77□□□□□ -1.17
CCDC58-204ENST00000479414 PTPN1P18031 435 aaKnown RBP7.77□□□□□ -1.17
CCDC58-204ENST00000479414 LIMS1P48059 325 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 LINC00310P59036 64 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 ZNF124Q15973 351 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 KCNA10Q16322 511 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 EP400NLQ6ZTU2 488 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 FAM129CQ86XR2 697 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 AHI1Q8N157 1196 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 DDX11Q96FC9 970 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 BOCQ9BWV1 1114 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 TMX1Q9H3N1 280 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 CABP5Q9NP86 173 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 CNOT6Q9ULM6 557 aaKnown RBP7.77□□□□□ -1.17
CCDC58-204ENST00000479414 MAPRE3Q9UPY8 281 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 KCTD3Q9Y597 815 aa7.77□□□□□ -1.17
CCDC58-204ENST00000479414 PI3P19957 117 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 MASP1P48740 699 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 NEK4P51957 841 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 BTBD8Q5XKL5 378 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 THNSL2Q86YJ6 484 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 CILP2Q8IUL8 1156 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 B4GALT6Q9UBX8 382 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 PRKAB1Q9Y478 270 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 B3GALT1Q9Y5Z6 326 aa7.76□□□□□ -1.17
CCDC58-204ENST00000479414 NPIPB6E9PJ23 425 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 RFXAPO00287 272 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 KCNK3O14649 394 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 PDE8AO60658 829 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 KPNA6O60684 536 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 ZBTB48P10074 688 aaPredicted RBP7.75□□□□□ -1.17
CCDC58-204ENST00000479414 HTRA3P83110 453 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 CAP1Q01518 475 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 PCBP1Q15365 356 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC58-204ENST00000479414 FSTL4Q6MZW2 842 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 PROSER1Q86XN7 944 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 LINC00482Q8N8I6 264 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 DLG3Q92796 817 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 GORASP1Q9BQQ3 440 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 RIC8BQ9NVN3 520 aa7.75□□□□□ -1.17
CCDC58-204ENST00000479414 C4BPAP04003 597 aaKnown RBP7.74□□□□□ -1.17
CCDC58-204ENST00000479414 PLA2G1BP04054 148 aaKnown RBP7.74□□□□□ -1.17
CCDC58-204ENST00000479414 YBX3P16989 372 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC58-204ENST00000479414 IRF9Q00978 393 aa7.74□□□□□ -1.17
CCDC58-204ENST00000479414 SEC23AQ15436 765 aa7.74□□□□□ -1.17
CCDC58-204ENST00000479414 ZNF385BQ569K4 471 aa7.74□□□□□ -1.17
CCDC58-204ENST00000479414 CNKSR3Q6P9H4 555 aa7.74□□□□□ -1.17
CCDC58-204ENST00000479414 NOX5Q96PH1 765 aa7.74□□□□□ -1.17
CCDC58-204ENST00000479414 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
CCDC58-204ENST00000479414 KCNH7Q9NS40 1196 aa7.74□□□□□ -1.17
CCDC58-204ENST00000479414 WASF3Q9UPY6 502 aa7.74□□□□□ -1.17
CCDC58-204ENST00000479414 PTPDC1A2A3K4 754 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 SCDO00767 359 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 F2P00734 622 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 VIL1P09327 827 aaKnown RBP7.73□□□□□ -1.17
CCDC58-204ENST00000479414 STAT3P40763 770 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 ITGA1P56199 1179 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 SEPT7Q16181 437 aaKnown RBP7.73□□□□□ -1.17
CCDC58-204ENST00000479414 CD276Q5ZPR3 534 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 PKN3Q6P5Z2 889 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 RNF180Q86T96 592 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 FNIP1Q8TF40 1166 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 DACT3Q96B18 629 aaPredicted RBP7.73□□□□□ -1.17
CCDC58-204ENST00000479414 C11orf84Q9BUA3 381 aaPredicted RBP7.73□□□□□ -1.17
CCDC58-204ENST00000479414 PMF1-BGLAPU3KQ54 211 aa7.73□□□□□ -1.17
CCDC58-204ENST00000479414 HIP1RO75146 1068 aa7.72□□□□□ -1.17
CCDC58-204ENST00000479414 HERVK_113P62684 666 aa7.72□□□□□ -1.17
CCDC58-204ENST00000479414 DSG1Q02413 1049 aa7.72□□□□□ -1.17
CCDC58-204ENST00000479414 DBPQ10586 325 aaPredicted RBP7.72□□□□□ -1.17
CCDC58-204ENST00000479414 CPZQ66K79 652 aa7.72□□□□□ -1.17
CCDC58-204ENST00000479414 PWWP2AQ96N64 755 aa7.72□□□□□ -1.17
CCDC58-204ENST00000479414 TMEM209Q96SK2 561 aa7.72□□□□□ -1.17
CCDC58-204ENST00000479414 SYT3Q9BQG1 590 aa7.72□□□□□ -1.17
CCDC58-204ENST00000479414 FAM126AQ9BYI3 521 aaPredicted RBP7.72□□□□□ -1.17
CCDC58-204ENST00000479414 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.71□□□□□ -1.18
CCDC58-204ENST00000479414 ANKRD62A6NC57 917 aa7.71□□□□□ -1.18
CCDC58-204ENST00000479414 SDHAP31040 664 aa7.71□□□□□ -1.18
CCDC58-204ENST00000479414 ADAM9Q13443 819 aa7.71□□□□□ -1.18
CCDC58-204ENST00000479414 CREB3L3Q68CJ9 461 aa7.71□□□□□ -1.18
CCDC58-204ENST00000479414 LIPIQ6XZB0 460 aa7.71□□□□□ -1.18
CCDC58-204ENST00000479414 TTLL6Q8N841 843 aa7.71□□□□□ -1.18
CCDC58-204ENST00000479414 KYQ8NBH2 561 aa7.71□□□□□ -1.18
CCDC58-204ENST00000479414 GPATCH3Q96I76 525 aa7.71□□□□□ -1.18
CCDC58-204ENST00000479414 CAAP1Q9H8G2 361 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms