RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 SNX16P57768 344 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 PPP2R2AP63151 447 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 SLC7A5Q01650 507 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 IFIT5Q13325 482 aaKnown RBP6.82□□□□□ -1.32
RC3H1-204ENST00000479099 SV2CQ496J9 727 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 DNAJC21Q5F1R6 531 aaKnown RBP6.82□□□□□ -1.32
RC3H1-204ENST00000479099 DGKKQ5KSL6 1271 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 GPATCH4Q5T3I0 446 aaKnown RBP6.82□□□□□ -1.32
RC3H1-204ENST00000479099 NUTM2GQ5VZR2 741 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 SLC6A19Q695T7 634 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 SMG8Q8ND04 991 aaKnown RBP6.82□□□□□ -1.32
RC3H1-204ENST00000479099 SHKBP1Q8TBC3 707 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 USP13Q92995 863 aaPredicted RBP6.82□□□□□ -1.32
RC3H1-204ENST00000479099 ATP6V1E2Q96A05 226 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 AHCYL2Q96HN2 611 aaKnown RBP6.82□□□□□ -1.32
RC3H1-204ENST00000479099 SCLYQ96I15 445 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 FAM167BQ9BTA0 163 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 USP26Q9BXU7 913 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 SUGCTQ9HAC7 445 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 PLEKHA5Q9HAU0 1116 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 CYP4F12Q9HCS2 524 aa6.82□□□□□ -1.32
RC3H1-204ENST00000479099 ZCCHC17Q9NP64 241 aaKnown RBP6.82□□□□□ -1.32
RC3H1-204ENST00000479099 LOC100289279A0A1B0GTE1 492 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.81□□□□□ -1.32
RC3H1-204ENST00000479099 RRN3P2A6NIE6 340 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 TRIM64CA6NLI5 447 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 ESRRAP11474 423 aaPredicted RBP6.81□□□□□ -1.32
RC3H1-204ENST00000479099 MAP4P27816 1152 aaKnown RBP6.81□□□□□ -1.32
RC3H1-204ENST00000479099 GABREP78334 506 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 HTRA3P83110 453 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 RPL6Q02878 288 aaKnown RBP6.81□□□□□ -1.32
RC3H1-204ENST00000479099 ZNF252P-AS1Q0IIN9 211 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 SEMA5AQ13591 1074 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 DCTN1Q14203 1278 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 SKOR2Q2VWA4 1001 aaPredicted RBP6.81□□□□□ -1.32
RC3H1-204ENST00000479099 CCDC158Q5M9N0 1113 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 RASIP1Q5U651 963 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 COLGALT2Q8IYK4 626 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 FAM156AQ8NDB6 213 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 OSBP2Q969R2 916 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 TBC1D31Q96DN5 1066 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 TBCBQ99426 244 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 SMOC1Q9H4F8 434 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 VTA1Q9NP79 307 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 MAFFQ9ULX9 164 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 CYP8B1Q9UNU6 501 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 MRFAP1Q9Y605 127 aa6.81□□□□□ -1.32
RC3H1-204ENST00000479099 SYNDIG1LA6NDD5 238 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 B4E1Z4 1266 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PCDHGA12O60330 932 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 GRIN3BO60391 1043 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 ULK1O75385 1050 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 TIPRLO75663 272 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 OFD1O75665 1012 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 TIAF1O95411 115 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 CAPNS1P04632 268 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 GYS1P13807 737 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 ELF1P32519 619 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PPM1AP35813 382 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 GP2P55259 537 aaKnown RBP6.8□□□□□ -1.32
RC3H1-204ENST00000479099 AP3B2Q13367 1082 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 CCNG2Q16589 344 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
RC3H1-204ENST00000479099 RPS26P11Q5JNZ5 115 aaPredicted RBP6.8□□□□□ -1.32
RC3H1-204ENST00000479099 ITPRIPL1Q6GPH6 555 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PLBD1Q6P4A8 553 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 NSMFQ6X4W1 530 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PDZD4Q76G19 769 aaPredicted RBP6.8□□□□□ -1.32
RC3H1-204ENST00000479099 DTX1Q86Y01 620 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 ANKRD13BQ86YJ7 626 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 OR2C3Q8N628 320 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 C12orf50Q8NA57 414 aaPredicted RBP6.8□□□□□ -1.32
RC3H1-204ENST00000479099 SLC30A5Q8TAD4 765 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 SH3KBP1Q96B97 665 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 RIPOR3Q96MK2 946 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 RMDN3Q96TC7 470 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 BARD1Q99728 777 aaKnown RBP6.8□□□□□ -1.32
RC3H1-204ENST00000479099 KRTAP4-12Q9BQ66 201 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 TTLL2Q9BWV7 592 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 MRPL9Q9BYD2 267 aaKnown RBP6.8□□□□□ -1.32
RC3H1-204ENST00000479099 SAMM50Q9Y512 469 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PCDHGA9Q9Y5G4 932 aaKnown RBP6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PCDHGA8Q9Y5G5 932 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PCDHGA7Q9Y5G6 932 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PCDHGA6Q9Y5G7 932 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PCDHGA3Q9Y5H0 932 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 PCDHGA2Q9Y5H1 932 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 SNCAIPQ9Y6H5 919 aa6.8□□□□□ -1.32
RC3H1-204ENST00000479099 TCRBV16S1A1N1A0A5B0 115 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 PRODHO43272 600 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 FKBP9O95302 570 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 BAG2O95816 211 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 CYP11A1P05108 521 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 NAT2P11245 290 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 BMP6P22004 513 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 XPAP23025 273 aaPredicted RBP6.79□□□□□ -1.32
RC3H1-204ENST00000479099 SMARCA1P28370 1054 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 IRAK1P51617 712 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 COPAP53621 1224 aa6.79□□□□□ -1.32
RC3H1-204ENST00000479099 IL2P60568 153 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms