RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SNX12Q9UMY4 172 aa11.94□□□□□ -0.5
VPS52-217ENST00000478934 PACSIN2Q9UNF0 486 aaPredicted RBP11.94□□□□□ -0.5
VPS52-217ENST00000478934 OPLAHO14841 1288 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 PRPF6O94906 941 aaKnown RBP11.93□□□□□ -0.5
VPS52-217ENST00000478934 NDUFB10O96000 172 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 SPATA31C1P0DKV0 1188 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 HOXD13P35453 343 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 GGCXP38435 758 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 PPP1R2P41236 205 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 SLC12A3P55017 1021 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 SPIRE1Q08AE8 756 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 ADAM9Q13443 819 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 KIAA1755Q5JYT7 1200 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 WDR93Q6P2C0 686 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 ZNF662Q6ZS27 426 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 LENG9Q96B70 501 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 KCTD10Q9H3F6 313 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 GH2P01242 217 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 MYBP10242 640 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 ECE1P42892 770 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 PPARDQ03181 441 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 PSMD2Q13200 908 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 CCDC84Q86UT8 332 aaPredicted RBP11.93□□□□□ -0.5
VPS52-217ENST00000478934 FAM133AQ8N9E0 248 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 ZDHHC15Q96MV8 337 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 BMP2KQ9NSY1 1161 aaPredicted RBP11.93□□□□□ -0.5
VPS52-217ENST00000478934 HPCAL4Q9UM19 191 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 SUGT1Q9Y2Z0 365 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 FOCADQ5VW36 1801 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 SMCHD1A6NHR9 2005 aa11.93□□□□□ -0.5
VPS52-217ENST00000478934 ECE2O60344 883 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 SLC9A1P19634 815 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 RAPGEF1Q13905 1077 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 AOC3Q16853 763 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 DACT2Q5SW24 774 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 SFR1Q86XK3 245 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 KSR1Q8IVT5 923 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 C10orf67Q8IYJ2 551 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 ETNPPLQ8TBG4 499 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 OSBPL9Q96SU4 736 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 REEP2Q9BRK0 252 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.92□□□□□ -0.5
VPS52-217ENST00000478934 SELENOOQ9BVL4 669 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 DHX36Q9H2U1 1008 aaKnown RBP11.92□□□□□ -0.5
VPS52-217ENST00000478934 GOLPH3Q9H4A6 298 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 PI4KBQ9UBF8 816 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.92□□□□□ -0.5
VPS52-217ENST00000478934 EML1O00423 815 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 USO1O60763 962 aaKnown RBP11.92□□□□□ -0.5
VPS52-217ENST00000478934 TACC1O75410 805 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 FTCDO95954 541 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 ACTN2P35609 894 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 GIT2Q14161 759 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 HYIQ5T013 277 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 TTC19Q6DKK2 380 aaPredicted RBP11.92□□□□□ -0.5
VPS52-217ENST00000478934 TRIM59Q8IWR1 403 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 CCDC65Q8IXS2 484 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 PIGOQ8TEQ8 1089 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 PRMT6Q96LA8 375 aaPredicted RBP11.92□□□□□ -0.5
VPS52-217ENST00000478934 TLR10Q9BXR5 811 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 GBP3Q9H0R5 595 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 ADAMTS1Q9UHI8 967 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 SCAF8Q9UPN6 1271 aaKnown RBP11.92□□□□□ -0.5
VPS52-217ENST00000478934 JRKLQ9Y4A0 524 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 MYH4Q9Y623 1939 aa11.92□□□□□ -0.5
VPS52-217ENST00000478934 A0A087X0T9 212 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 CLIC2O15247 247 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 MSH4O15457 936 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 FGFR1OPO95684 399 aaKnown RBP11.91□□□□□ -0.5
VPS52-217ENST00000478934 FAM228BP0C875 321 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
VPS52-217ENST00000478934 ALDH1B1P30837 517 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 CASP4P49662 377 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 ABCB5Q2M3G0 1257 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 DNAJC21Q5F1R6 531 aaKnown RBP11.91□□□□□ -0.5
VPS52-217ENST00000478934 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 TRIM58Q8NG06 486 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 CRYGNQ8WXF5 182 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 MKL1Q969V6 931 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 CCDC17Q96LX7 622 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 RUSC1Q9BVN2 902 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 ZSCAN5CA6NGD5 496 aaPredicted RBP11.91□□□□□ -0.5
VPS52-217ENST00000478934 CHMP2AO43633 222 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 LCA5LO95447 670 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 NR2F2P24468 414 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 KCNH2Q12809 1159 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 KLHDC7AQ5VTJ3 777 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 SFMBT2Q5VUG0 894 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 GJB7Q6PEY0 223 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 CCNI2Q6ZMN8 369 aaPredicted RBP11.91□□□□□ -0.5
VPS52-217ENST00000478934 LEKR1Q6ZMV7 388 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 SPATA4Q8NEY3 305 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 ACER1Q8TDN7 264 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 EHD4Q9H223 541 aa11.91□□□□□ -0.5
VPS52-217ENST00000478934 BHMT2Q9H2M3 363 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms