RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 UTP14CQ5TAP6 766 aaKnown RBP21.44■■□□□ 1.02
SREBF1-212ENST00000478616 SERINC5Q86VE9 423 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 LENG9Q96B70 501 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 FAM161BQ96MY7 647 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 PBX4Q9BYU1 374 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 SEMA6BQ9H3T3 888 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 MYO9BQ13459 2157 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 MICAL3Q7RTP6 2002 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.43■■□□□ 1.02
SREBF1-212ENST00000478616 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.43■■□□□ 1.02
SREBF1-212ENST00000478616 NOP56O00567 594 aaKnown RBP21.43■■□□□ 1.02
SREBF1-212ENST00000478616 MAFGO15525 162 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 PFKFB2O60825 505 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 CCNE2O96020 404 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 PTK7Q13308 1070 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 CAGE1Q8TC20 777 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 CDHR1Q96JP9 859 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 SETD4Q9NVD3 440 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 LOXHD1Q8IVV2 1947 aa21.43■■□□□ 1.02
SREBF1-212ENST00000478616 LGR5O75473 907 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 NFASCO94856 1347 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 CXCL10P02778 98 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 EYSQ5T1H1 3165 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 ZNF618Q5T7W0 954 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 REXO1Q8N1G1 1221 aaKnown RBP21.42■■□□□ 1.02
SREBF1-212ENST00000478616 AFAP1L1Q8TED9 768 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 SEPT1Q8WYJ6 367 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 UIMC1Q96RL1 719 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 KIF2CQ99661 725 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 GLT8D2Q9H1C3 349 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 C6orf50Q9HD87 102 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 GJB4Q9NTQ9 266 aa21.42■■□□□ 1.02
SREBF1-212ENST00000478616 YBX2Q9Y2T7 364 aaKnown RBP21.42■■□□□ 1.02
SREBF1-212ENST00000478616 ATG7O95352 703 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 SELPP16109 830 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 DNAJB2P25686 324 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 MKRN4PQ13434 485 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-212ENST00000478616 BFSP2Q13515 415 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 ME3Q16798 604 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 LRRC8DQ7L1W4 858 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 NIPA1Q7RTP0 329 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 GIMAP8Q8ND71 665 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-212ENST00000478616 LMBR1Q8WVP7 490 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 EHMT1Q9H9B1 1298 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 SH3GLB2Q9NR46 395 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 NOD1Q9Y239 953 aa21.41■■□□□ 1.02
SREBF1-212ENST00000478616 MYH9P35579 1960 aaKnown RBP21.41■■□□□ 1.02
SREBF1-212ENST00000478616 EMSYQ7Z589 1322 aa21.4■■□□□ 1.02
SREBF1-212ENST00000478616 C17orf102A2RUQ5 167 aa21.4■■□□□ 1.02
SREBF1-212ENST00000478616 FDPSP14324 419 aaKnown RBP21.4■■□□□ 1.02
SREBF1-212ENST00000478616 CIITAP33076 1130 aa21.4■■□□□ 1.02
SREBF1-212ENST00000478616 RFC2P35250 354 aa21.4■■□□□ 1.02
SREBF1-212ENST00000478616 SSRP1Q08945 709 aaKnown RBP21.4■■□□□ 1.02
SREBF1-212ENST00000478616 MARCH8Q5T0T0 291 aa21.4■■□□□ 1.02
SREBF1-212ENST00000478616 RPUSD2Q8IZ73 545 aaKnown RBP21.4■■□□□ 1.02
SREBF1-212ENST00000478616 ZBTB10Q96DT7 871 aa21.4■■□□□ 1.02
SREBF1-212ENST00000478616 JPH1Q9HDC5 661 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-212ENST00000478616 SLC9A2Q9UBY0 812 aa21.4■■□□□ 1.02
SREBF1-212ENST00000478616 IGKV6D-21A0A0A0MT36 114 aa21.39■■□□□ 1.01
SREBF1-212ENST00000478616 DEXIO95424 95 aa21.39■■□□□ 1.01
SREBF1-212ENST00000478616 RABGGTBP53611 331 aa21.39■■□□□ 1.01
SREBF1-212ENST00000478616 ACTR2P61160 394 aa21.39■■□□□ 1.01
SREBF1-212ENST00000478616 PLA2G4DQ86XP0 818 aa21.39■■□□□ 1.01
SREBF1-212ENST00000478616 NECAB1Q8N987 351 aa21.39■■□□□ 1.01
SREBF1-212ENST00000478616 RETREG2Q8NC44 543 aa21.39■■□□□ 1.01
SREBF1-212ENST00000478616 ATP6V0A1Q93050 837 aa21.39■■□□□ 1.01
SREBF1-212ENST00000478616 EVPLQ92817 2033 aa21.38■■□□□ 1.01
SREBF1-212ENST00000478616 PFKMP08237 780 aa21.38■■□□□ 1.01
SREBF1-212ENST00000478616 MYOGP15173 224 aa21.38■■□□□ 1.01
SREBF1-212ENST00000478616 MARK3P27448 753 aa21.38■■□□□ 1.01
SREBF1-212ENST00000478616 GNA11P29992 359 aa21.38■■□□□ 1.01
SREBF1-212ENST00000478616 AKAP17AQ02040 695 aaKnown RBP21.38■■□□□ 1.01
SREBF1-212ENST00000478616 ZNF697Q5TEC3 545 aa21.38■■□□□ 1.01
SREBF1-212ENST00000478616 RUFY4Q6ZNE9 571 aa21.38■■□□□ 1.01
SREBF1-212ENST00000478616 CCDC12Q8WUD4 166 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-212ENST00000478616 CDX2Q99626 313 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-212ENST00000478616 KCNJ14Q9UNX9 436 aa21.38■■□□□ 1.01
SREBF1-212ENST00000478616 STK36Q9NRP7 1315 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 ARHGEF15O94989 841 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 ATP4AP20648 1035 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 GRIN2CQ14957 1233 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 ABHD15Q6UXT9 468 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 DAGLBQ8NCG7 672 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 CCDC148Q8NFR7 591 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 PCDHA4Q9UN74 947 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 STXBP5LQ9Y2K9 1186 aa21.37■■□□□ 1.01
SREBF1-212ENST00000478616 MBLAC1A4D2B0 266 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-212ENST00000478616 PLCB4Q15147 1175 aa21.36■■□□□ 1.01
SREBF1-212ENST00000478616 TMCO2Q7Z6W1 182 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-212ENST00000478616 CCDC60Q8IWA6 550 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-212ENST00000478616 CCDC155Q8N6L0 562 aa21.36■■□□□ 1.01
SREBF1-212ENST00000478616 GJA10Q969M2 543 aa21.36■■□□□ 1.01
SREBF1-212ENST00000478616 SLKQ9H2G2 1235 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-212ENST00000478616 ZNF215Q9UL58 517 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-212ENST00000478616 TMEM265A0A087WTH1 108 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 DDX39AO00148 427 aaKnown RBP21.35■■□□□ 1.01
SREBF1-212ENST00000478616 CPLX1O14810 134 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 THPOP40225 353 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 NLRP5P59047 1200 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 TRIM22Q8IYM9 498 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms