RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 GRK3P35626 688 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 KIZQ2M2Z5 673 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 STYK1Q6J9G0 422 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 TRMT10BQ6PF06 316 aaKnown RBP6.74□□□□□ -1.33
LMBR1-216ENST00000477983 KCNT2Q6UVM3 1135 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 KBTBD2Q8IY47 623 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 ZNF669Q96BR6 464 aaPredicted RBP6.74□□□□□ -1.33
LMBR1-216ENST00000477983 BARX1Q9HBU1 254 aaPredicted RBP6.74□□□□□ -1.33
LMBR1-216ENST00000477983 CD248Q9HCU0 757 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 NUB1Q9Y5A7 615 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 NPEPPSL1A6NEC2 478 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 PRODHO43272 600 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 KLHL18O94889 574 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 EPHA5P54756 1037 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 GPR85P60893 370 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 GRIN1Q05586 938 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 SPIRE1Q08AE8 756 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 TUSC3Q13454 348 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 PAN2Q504Q3 1202 aaKnown RBP6.73□□□□□ -1.33
LMBR1-216ENST00000477983 VASNQ6EMK4 673 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 NSMFQ6X4W1 530 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 ARHGEF18Q6ZSZ5 1173 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 IFNL3Q8IZI9 196 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 ST6GALNAC2Q9UJ37 374 aa6.73□□□□□ -1.33
LMBR1-216ENST00000477983 NKRFO15226 690 aaKnown RBP eCLIP6.72□□□□□ -1.33
LMBR1-216ENST00000477983 B4GALT4O60513 344 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 CKMP06732 381 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 COL6A2P12110 1019 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 ZXDAP98168 799 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 RAB33AQ14088 237 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 ICAM4Q14773 271 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 CDSNQ15517 529 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 SMAD2Q15796 467 aaKnown RBP6.72□□□□□ -1.33
LMBR1-216ENST00000477983 SLFN13Q68D06 897 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 RBM12BQ8IXT5 1001 aaKnown RBP6.72□□□□□ -1.33
LMBR1-216ENST00000477983 NUDT10Q8NFP7 164 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.72□□□□□ -1.33
LMBR1-216ENST00000477983 NUDT11Q96G61 164 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 TSC22D4Q9Y3Q8 395 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 TELO2Q9Y4R8 837 aa6.72□□□□□ -1.33
LMBR1-216ENST00000477983 TRAV20A0A0B4J274 112 aa6.71□□□□□ -1.34
LMBR1-216ENST00000477983 KNG1P01042 644 aa6.71□□□□□ -1.34
LMBR1-216ENST00000477983 ENO2P09104 434 aaPredicted RBP6.71□□□□□ -1.34
LMBR1-216ENST00000477983 Q6ZUG5 572 aa6.71□□□□□ -1.34
LMBR1-216ENST00000477983 CIR1Q86X95 450 aaPredicted RBP6.71□□□□□ -1.34
LMBR1-216ENST00000477983 LRRC47Q8N1G4 583 aaKnown RBP6.71□□□□□ -1.34
LMBR1-216ENST00000477983 AJUBAQ96IF1 538 aa6.71□□□□□ -1.34
LMBR1-216ENST00000477983 ZDHHC9Q9Y397 364 aa6.71□□□□□ -1.34
LMBR1-216ENST00000477983 ABCC8Q09428 1581 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 PATE3B3GLJ2 98 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 FAM47E-STBD1D6RA91 191 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 E9PSI1 815 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 LTFP02788 710 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 SOD2P04179 222 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 GNAT1P11488 350 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 DPH6Q7L8W6 267 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.7□□□□□ -1.34
LMBR1-216ENST00000477983 PTPN18Q99952 460 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 KCND1Q9NSA2 647 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 DSEQ9UL01 958 aa6.7□□□□□ -1.34
LMBR1-216ENST00000477983 ACOT7O00154 380 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 AKAP8O43823 692 aaKnown RBP6.69□□□□□ -1.34
LMBR1-216ENST00000477983 PFKPQ01813 784 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 IFRD2Q12894 506 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-216ENST00000477983 SKIDA1Q1XH10 827 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 YOD1Q5VVQ6 348 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-216ENST00000477983 CD276Q5ZPR3 534 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 FAM9AQ8IZU1 332 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-216ENST00000477983 CDK5RAP1Q96SZ6 601 aaKnown RBP6.69□□□□□ -1.34
LMBR1-216ENST00000477983 KCNJ15Q99712 375 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 KATNBL1Q9H079 304 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 KLC2Q9H0B6 622 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 MEGF9Q9H1U4 602 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 SEC61A2Q9H9S3 476 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 MSRB2Q9Y3D2 182 aa6.69□□□□□ -1.34
LMBR1-216ENST00000477983 ASXL2Q76L83 1435 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 LOC105371045A0A1W2PR82 267 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 ZNF839A8K0R7 811 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 ZC3H6P61129 1189 aaKnown RBP6.68□□□□□ -1.34
LMBR1-216ENST00000477983 PHF19Q5T6S3 580 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 KCTD1Q719H9 257 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 KISS1RQ969F8 398 aaPredicted RBP6.68□□□□□ -1.34
LMBR1-216ENST00000477983 WWC2-AS2Q96NR7 200 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 TRIM55Q9BYV6 548 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 IPPKQ9H8X2 491 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 ARHGAP20Q9P2F6 1191 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 ZFP69BQ9UJL9 534 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 SLC4A7Q9Y6M7 1214 aa6.68□□□□□ -1.34
LMBR1-216ENST00000477983 BLACEA4D250 179 aa6.67□□□□□ -1.34
LMBR1-216ENST00000477983 WNT9AO14904 365 aa6.67□□□□□ -1.34
LMBR1-216ENST00000477983 FBXO21O94952 628 aa6.67□□□□□ -1.34
LMBR1-216ENST00000477983 CNOT4O95628 575 aaKnown RBP6.67□□□□□ -1.34
LMBR1-216ENST00000477983 IL18BPO95998 194 aa6.67□□□□□ -1.34
LMBR1-216ENST00000477983 SPRED1Q7Z699 444 aa6.67□□□□□ -1.34
LMBR1-216ENST00000477983 SH3RF2Q8TEC5 729 aa6.67□□□□□ -1.34
LMBR1-216ENST00000477983 SH3RF3Q8TEJ3 882 aaPredicted RBP6.67□□□□□ -1.34
LMBR1-216ENST00000477983 SPATA9Q9BWV2 254 aa6.67□□□□□ -1.34
LMBR1-216ENST00000477983 JADE2Q9NQC1 790 aa6.67□□□□□ -1.34
LMBR1-216ENST00000477983 TCRBV5S4A2TA0A5A2 114 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms