RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 CMTR1Q8N1G2 835 aaKnown RBP13.52□□□□□ -0.25
CPSF7-211ENST00000477890 GIMAP8Q8ND71 665 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-211ENST00000477890 APBB2Q92870 758 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 MRPL38Q96DV4 380 aaKnown RBP13.52□□□□□ -0.25
CPSF7-211ENST00000477890 SAMD11Q96NU1 681 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 IFIH1Q9BYX4 1025 aaKnown RBP13.52□□□□□ -0.25
CPSF7-211ENST00000477890 NRCAMQ92823 1304 aa13.52□□□□□ -0.25
CPSF7-211ENST00000477890 RALGAPA2Q2PPJ7 1873 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 ATP9AO75110 1047 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 RXRAP19793 462 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 MCM5P33992 734 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 GNAQP50148 359 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 GPM6BQ13491 265 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 LEXMQ3ZCV2 418 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 FAM26DQ5JW98 314 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 TMEM192Q8IY95 271 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 TMTC2Q8N394 836 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 SRBD1Q8N5C6 995 aaKnown RBP13.51□□□□□ -0.25
CPSF7-211ENST00000477890 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.254e-8■■□□□ 14
CPSF7-211ENST00000477890 GPRASP2Q96D09 838 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 MTA3Q9BTC8 594 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 LRFN3Q9BTN0 628 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 PSTPIP2Q9H939 334 aa13.51□□□□□ -0.25
CPSF7-211ENST00000477890 H3BNC9 293 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-211ENST00000477890 CHRNA1P02708 482 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 KCNA2P16389 499 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 MARK3P27448 753 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 PLA2G5P39877 138 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 IRX6P78412 446 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-211ENST00000477890 PPFIA1Q13136 1202 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 TIGD5Q53EQ6 642 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 TMEM31Q5JXX7 168 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 RUFY4Q6ZNE9 571 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-211ENST00000477890 CDHR1Q96JP9 859 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 TMEM87BQ96K49 555 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 CD320Q9NPF0 282 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 PKD2L1Q9P0L9 805 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 COL4A6Q14031 1691 aa13.5□□□□□ -0.25
CPSF7-211ENST00000477890 GSTTP1A0A1W2PQM5 241 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 hCG_1642624A0A1W2PR95 340 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 SPDYE3A6NKU9 549 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 CALM1P0DP23 149 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 CALM2P0DP24 149 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 CALM3P0DP25 149 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 GHRP10912 638 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 IL9P15248 144 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 ITGB5P18084 799 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 MTMR1Q13613 665 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
CPSF7-211ENST00000477890 GRIK4Q16099 956 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 UBE2SQ16763 222 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 TAF2Q6P1X5 1199 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 RSPH3Q86UC2 560 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 CCDC82Q8N4S0 544 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 BANK1Q8NDB2 785 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 SEPT1Q8WYJ6 367 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 GLG1Q92896 1179 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 FAM122AQ96E09 287 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 IL17RAQ96F46 866 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 ERAP1Q9NZ08 941 aa13.49□□□□□ -0.25
CPSF7-211ENST00000477890 SLC27A2O14975 620 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 LIFRP42702 1097 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 LPIN1Q14693 890 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 TCEAL5Q5H9L2 206 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 PTCRAQ6ISU1 281 aaPredicted RBP13.48□□□□□ -0.25
CPSF7-211ENST00000477890 EP400NLQ6ZTU2 488 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 RPAINQ86UA6 219 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 FAM178BQ8IXR5 827 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 FIBCD1Q8N539 461 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 LRRC2Q9BYS8 371 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 LSG1Q9H089 658 aaKnown RBP13.48□□□□□ -0.25
CPSF7-211ENST00000477890 TUBE1Q9UJT0 475 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 PCDHA6Q9UN73 950 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 HCN4Q9Y3Q4 1203 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 PCDHA8Q9Y5H6 950 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 UBIAD1Q9Y5Z9 338 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 SLC12A7Q9Y666 1083 aa13.48□□□□□ -0.25
CPSF7-211ENST00000477890 MYO7AQ13402 2215 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 ATG2AQ2TAZ0 1938 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 PI4K2BG5E9Z4 385 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 H3BQ06 376 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-211ENST00000477890 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-211ENST00000477890 CTNNB1P35222 781 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 IGBP1P78318 339 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 MGAT3Q09327 533 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 CREB3L3Q68CJ9 461 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 HEATR3Q7Z4Q2 680 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 GJD3Q8N144 294 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 NEK9Q8TD19 979 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 DNAJB3Q8WWF6 145 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 NSUN3Q9H649 340 aaKnown RBP13.47□□□□□ -0.25
CPSF7-211ENST00000477890 EHMT1Q9H9B1 1298 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 JADE2Q9NQC1 790 aa13.47□□□□□ -0.25
CPSF7-211ENST00000477890 CDY2AQ9Y6F7 541 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms