RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 FGD2Q7Z6J4 655 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 ZCRB1Q8TBF4 217 aaKnown RBP6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 FNIP1Q8TF40 1166 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 IRF2BPLQ9H1B7 796 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 CATSPERZQ9NTU4 200 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 IFT57Q9NWB7 429 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 CBLCQ9ULV8 474 aa6.54□□□□□ -1.36
SMNDC1-205ENST00000477763 TCRBV5S4A2TA0A5A2 114 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 LRG1P02750 347 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 PLA2G1BP04054 148 aaKnown RBP6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 MYCLP1P12525 358 aaPredicted RBP6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 PDE6AP16499 860 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 FLT3P36888 993 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 TEPPQ6URK8 271 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 ARHGAP36Q6ZRI8 547 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 FAM26EQ8N5C1 309 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 SH3RF2Q8TEC5 729 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 CLEC4DQ8WXI8 215 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 SRPK3Q9UPE1 567 aa6.53□□□□□ -1.36
SMNDC1-205ENST00000477763 OPA1O60313 960 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 ASLP04424 464 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 AMY2AP04746 511 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 KCNA6P17658 529 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 AMY2BP19961 511 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 SDSP20132 328 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 IGFALSP35858 605 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 STAT5AP42229 794 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 FIGNQ5HY92 759 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 CNNM4Q6P4Q7 775 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 SAPCD2Q86UD0 394 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 TTLL6Q8N841 843 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 GORASP1Q9BQQ3 440 aa6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 C11orf84Q9BUA3 381 aaPredicted RBP6.52□□□□□ -1.37
SMNDC1-205ENST00000477763 SH3D21A4FU49 640 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 MAN2B1O00754 1011 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 DNAJC8O75937 253 aaPredicted RBP6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 FAHP16930 419 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 GJA4P35212 333 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 DNM2P50570 870 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 ITGA1P56199 1179 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 VWA3BQ502W6 1294 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 PAN2Q504Q3 1202 aaKnown RBP6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 HHIPL2Q6UWX4 724 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 UBE2R2Q712K3 238 aaPredicted RBP6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 DDX53Q86TM3 631 aaKnown RBP6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 LRRTM3Q86VH5 581 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 OSTM1Q86WC4 334 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 AHI1Q8N157 1196 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 LINC01356Q8N9X3 169 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 KYQ8NBH2 561 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 NOX5Q96PH1 765 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 TELO2Q9Y4R8 837 aa6.51□□□□□ -1.37
SMNDC1-205ENST00000477763 ZSCAN22P10073 491 aaPredicted RBP6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 JAM2P57087 298 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 DLX2Q07687 328 aaPredicted RBP6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 PTPROQ16827 1216 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 ZCCHC8Q6NZY4 707 aaKnown RBP6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 ABHD17CQ6PCB6 329 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 LCNL1Q6ZST4 164 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 OVCH1Q7RTY7 1134 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 RBM12BQ8IXT5 1001 aaKnown RBP6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 PPM1KQ8N3J5 372 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 CHAC2Q8WUX2 184 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 DDX1Q92499 740 aaKnown RBP6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 PUS7Q96PZ0 661 aaKnown RBP6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 TMEM209Q96SK2 561 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 CD244Q9BZW8 370 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 BRINP2Q9C0B6 783 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 CAAP1Q9H8G2 361 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 SMURF1Q9HCE7 757 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 MAPRE3Q9UPY8 281 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 COQ6Q9Y2Z9 468 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 TNPO3Q9Y5L0 923 aaKnown RBP6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 ATP23Q9Y6H3 246 aa6.5□□□□□ -1.37
SMNDC1-205ENST00000477763 A0A087X0B3 334 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 FFAR3O14843 346 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 PDE8AO60658 829 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 CLASP2O75122 1294 aaKnown RBP6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 LTFP02788 710 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 VIL1P09327 827 aaKnown RBP6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 SOX5P35711 763 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 NEK4P51957 841 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 GRIN1Q05586 938 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 CFAP100Q494V2 611 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 CT47A1Q5JQC4 288 aaPredicted RBP6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 EP400NLQ6ZTU2 488 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 KRT26Q7Z3Y9 468 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 PTRH1Q86Y79 214 aaKnown RBP6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 IGSF22Q8N9C0 903 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 ZBTB8AQ96BR9 441 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 WRNIP1Q96S55 665 aa6.49□□□□□ -1.37
SMNDC1-205ENST00000477763 ACOT7O00154 380 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 JMJD7P0C870 316 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 PTPN1P18031 435 aaKnown RBP6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 KRT15P19012 456 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 CNGA1P29973 690 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 THBS2P35442 1172 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms