RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 GSPT2Q8IYD1 628 aaKnown RBP19.91■□□□□ 0.78
CCM2-209ENST00000477605 PCDHGC5Q9Y5F6 944 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 FOCADQ5VW36 1801 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 GTF2IP78347 998 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 PICALMQ13492 652 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 HDAC7Q8WUI4 952 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 NLRC4Q9NPP4 1024 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 EMILIN3Q9NT22 766 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 KIAA1024Q9UPX6 916 aa19.91■□□□□ 0.78
CCM2-209ENST00000477605 BZW2Q9Y6E2 419 aaKnown RBP19.91■□□□□ 0.78
CCM2-209ENST00000477605 KLRG2A4D1S0 409 aaPredicted RBP19.9■□□□□ 0.78
CCM2-209ENST00000477605 C6orf229H3BNL8 230 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 CETN3O15182 167 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 HLA-DOAP06340 250 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 CYP11B2P19099 503 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 ANXA13P27216 316 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 SHMT1P34896 483 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 POLR2FP61218 127 aaKnown RBP19.9■□□□□ 0.78
CCM2-209ENST00000477605 HERC4Q5GLZ8 1057 aaPredicted RBP19.9■□□□□ 0.78
CCM2-209ENST00000477605 GPBP1Q86WP2 473 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 SP8Q8IXZ3 490 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 EHD4Q9H223 541 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 GDF3Q9NR23 364 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 ATP8B3O60423 1300 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 TBX3O15119 743 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 NAP1L1P55209 391 aaKnown RBP19.9■□□□□ 0.78
CCM2-209ENST00000477605 ATP2B2Q01814 1243 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 AP3B2Q13367 1082 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 SCFD1Q8WVM8 642 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.9■□□□□ 0.78
CCM2-209ENST00000477605 GDAP1L1Q96MZ0 367 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 PLCB1Q9NQ66 1216 aa19.9■□□□□ 0.78
CCM2-209ENST00000477605 USP17L10C9JJH3 530 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 E9PMD0 336 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 HSF2BPO75031 334 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 SSBP05455 408 aaKnown RBP eCLIP19.89■□□□□ 0.77
CCM2-209ENST00000477605 EIF6P56537 245 aaKnown RBP19.89■□□□□ 0.77
CCM2-209ENST00000477605 ADAM9Q13443 819 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 ASIC2Q16515 512 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 MEI1Q5TIA1 1274 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 TTBK2Q6IQ55 1244 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 FRMD5Q7Z6J6 570 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 ANKRD13CQ8N6S4 541 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 RIN2Q8WYP3 895 aaPredicted RBP19.89■□□□□ 0.77
CCM2-209ENST00000477605 TRERF1Q96PN7 1200 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 FAM107BQ9H098 131 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 RBM12Q9NTZ6 932 aaKnown RBP19.89■□□□□ 0.77
CCM2-209ENST00000477605 TMEM51Q9NW97 253 aa19.89■□□□□ 0.77
CCM2-209ENST00000477605 NCK2O43639 380 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 GYS1P13807 737 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 CXCR5P32302 372 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 KLHL30Q0D2K2 578 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 KCTD17Q8N5Z5 321 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 EIF1ADQ8N9N8 165 aaKnown RBP19.88■□□□□ 0.77
CCM2-209ENST00000477605 ERMNQ8TAM6 284 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 DCAF4Q8WV16 495 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 TBC1D5Q92609 795 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 MKL1Q969V6 931 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 MXD3Q9BW11 206 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 GANQ9H2C0 597 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 DDX4Q9NQI0 724 aaKnown RBP19.88■□□□□ 0.77
CCM2-209ENST00000477605 USP40Q9NVE5 1235 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 TRAF3IP3Q9Y228 551 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.88■□□□□ 0.77
CCM2-209ENST00000477605 BUB1O43683 1085 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 PALMO75781 387 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 EPS15P42566 896 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 MATR3P43243 847 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCM2-209ENST00000477605 PAK2Q13177 524 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 IFI16Q16666 785 aaKnown RBP19.88■□□□□ 0.77
CCM2-209ENST00000477605 HHIPL2Q6UWX4 724 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 MREGQ8N565 214 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 RUFY1Q96T51 708 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 LCMT1Q9UIC8 334 aa19.88■□□□□ 0.77
CCM2-209ENST00000477605 UBR3Q6ZT12 1888 aa19.87■□□□□ 0.77
CCM2-209ENST00000477605 SLC12A3P55017 1021 aa19.87■□□□□ 0.77
CCM2-209ENST00000477605 DNAJC21Q5F1R6 531 aaKnown RBP19.87■□□□□ 0.77
CCM2-209ENST00000477605 DHX36Q9H2U1 1008 aaKnown RBP19.87■□□□□ 0.77
CCM2-209ENST00000477605 SLC7A5Q01650 507 aa19.87■□□□□ 0.77
CCM2-209ENST00000477605 RAPGEF1Q13905 1077 aa19.87■□□□□ 0.77
CCM2-209ENST00000477605 NELFCDQ8IXH7 590 aa19.87■□□□□ 0.77
CCM2-209ENST00000477605 FLAD1Q8NFF5 587 aa19.87■□□□□ 0.77
CCM2-209ENST00000477605 ANO3Q9BYT9 981 aa19.87■□□□□ 0.77
CCM2-209ENST00000477605 RSPH14Q9UHP6 348 aa19.87■□□□□ 0.77
CCM2-209ENST00000477605 KRT18P05783 430 aaKnown RBP19.86■□□□□ 0.77
CCM2-209ENST00000477605 SLC16A2P36021 539 aa19.86■□□□□ 0.77
CCM2-209ENST00000477605 IRAK1P51617 712 aa19.86■□□□□ 0.77
CCM2-209ENST00000477605 SKOR1P84550 965 aa19.86■□□□□ 0.77
CCM2-209ENST00000477605 KCNH2Q12809 1159 aa19.86■□□□□ 0.77
CCM2-209ENST00000477605 KIAA0753Q2KHM9 967 aa19.86■□□□□ 0.77
CCM2-209ENST00000477605 FOXR1Q6PIV2 292 aa19.86■□□□□ 0.77
CCM2-209ENST00000477605 C1orf131Q8NDD1 294 aaKnown RBP19.86■□□□□ 0.77
CCM2-209ENST00000477605 NYAP2Q9P242 653 aa19.86■□□□□ 0.77
CCM2-209ENST00000477605 FBXL5Q9UKA1 691 aa19.86■□□□□ 0.77
CCM2-209ENST00000477605 POTEB3A0JP26 581 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 POTECB2RU33 542 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 KLRC1P26715 233 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 MAGEA9P43362 315 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 QRICH1Q2TAL8 776 aa19.85■□□□□ 0.77
CCM2-209ENST00000477605 Q4G0T1 1027 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms