RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 PPP2CBP62714 309 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 PPP2CAP67775 309 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 KCNAB2Q13303 367 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 SQSTM1Q13501 440 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 PRSS53Q2L4Q9 553 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 FAM209AQ5JX71 171 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 PKN3Q6P5Z2 889 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 NSMFQ6X4W1 530 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 KBTBD2Q8IY47 623 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 TMEM145Q8NBT3 493 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 DNERQ8NFT8 737 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 SH3TC2Q8TF17 1288 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 OSBP2Q969R2 916 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 EXOC2Q96KP1 924 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 CCDC140Q96MF4 163 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 CDC6Q99741 560 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 MENTQ9BUN1 341 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 FTSJ1Q9UET6 329 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 CROTQ9UKG9 612 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 TCAF1Q9Y4C2 921 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 PTCH2Q9Y6C5 1203 aa3.84□□□□□ -1.79
CACUL1-202ENST00000477583 MRPL42Q9Y6G3 142 aaKnown RBP3.84□□□□□ -1.79
CACUL1-202ENST00000477583 ESYT3A0FGR9 886 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 TLDC2A0PJX2 215 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 HGSO14964 777 aaPredicted RBP3.83□□□□□ -1.8
CACUL1-202ENST00000477583 MUSKO15146 869 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 DLX3O60479 287 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 LONRF2Q1L5Z9 754 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 SLFN13Q68D06 897 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 DENND5AQ6IQ26 1287 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 TEPPQ6URK8 271 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 CCDC103Q8IW40 242 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 KLHL36Q8N4N3 616 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 ARRDC4Q8NCT1 418 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 KREMEN2Q8NCW0 462 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 ZCCHC14Q8WYQ9 949 aaKnown RBP3.83□□□□□ -1.8
CACUL1-202ENST00000477583 KCTD13Q8WZ19 329 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 C1orf159Q96HA4 380 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 TMEM209Q96SK2 561 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 SLITRK6Q9H5Y7 841 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 BARX1Q9HBU1 254 aaPredicted RBP3.83□□□□□ -1.8
CACUL1-202ENST00000477583 TMEFF2Q9UIK5 374 aaPredicted RBP3.83□□□□□ -1.8
CACUL1-202ENST00000477583 FBXL7Q9UJT9 491 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 TBX22Q9Y458 520 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 PCDHB4Q9Y5E5 795 aa3.83□□□□□ -1.8
CACUL1-202ENST00000477583 TRBV23-1A0A0A0MS06 115 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 TCRBV5S2A0A599 114 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 BLACEA4D250 179 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 ARNTLO00327 626 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 B4GALT4O60513 344 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 CPP00450 1065 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 AMHP03971 560 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 MAP4K2Q12851 820 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 NTRK3Q16288 839 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 EMC4Q5J8M3 183 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 SLC35F1Q5T1Q4 408 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 STEAP3Q658P3 488 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 TRMT10BQ6PF06 316 aaKnown RBP3.82□□□□□ -1.8
CACUL1-202ENST00000477583 SCUBE1Q8IWY4 988 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 ZSWIM2Q8NEG5 633 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 CHAMP1Q96JM3 812 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 PTPN18Q99952 460 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 DHRS4Q9BTZ2 278 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 PCED1AQ9H1Q7 454 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 SEMA4AQ9H3S1 761 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 TMEM260Q9NX78 707 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 ZDHHC9Q9Y397 364 aa3.82□□□□□ -1.8
CACUL1-202ENST00000477583 MRPS23Q9Y3D9 190 aaKnown RBP3.82□□□□□ -1.8
CACUL1-202ENST00000477583 PATE3B3GLJ2 98 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 H7BY64 318 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 ZNF623O75123 536 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 SUMO1P63165 101 aaKnown RBP3.81□□□□□ -1.8
CACUL1-202ENST00000477583 NFATC3Q12968 1075 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 LSAMPQ13449 338 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 R3HDM1Q15032 1099 aaKnown RBP3.81□□□□□ -1.8
CACUL1-202ENST00000477583 ZC3H12BQ5HYM0 836 aaKnown RBP3.81□□□□□ -1.8
CACUL1-202ENST00000477583 CRB2Q5IJ48 1285 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 SPDYAQ5MJ70 313 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 ACBD5Q5T8D3 534 aaPredicted RBP3.81□□□□□ -1.8
CACUL1-202ENST00000477583 SDE2Q6IQ49 451 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 TMC5Q6UXY8 1006 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 USP53Q70EK8 1073 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 PPIL6Q8IXY8 311 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 RCBTB1Q8NDN9 531 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 IPO9Q96P70 1041 aaKnown RBP3.81□□□□□ -1.8
CACUL1-202ENST00000477583 MEGF9Q9H1U4 602 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 FANCLQ9NW38 375 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 TMA7Q9Y2S6 64 aaKnown RBP3.81□□□□□ -1.8
CACUL1-202ENST00000477583 PCDHA2Q9Y5H9 948 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 HS3ST3A1Q9Y663 406 aa3.81□□□□□ -1.8
CACUL1-202ENST00000477583 LOC105371045A0A1W2PR82 267 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 TADA3O75528 432 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 LRG1P02750 347 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 C6orf222P0C671 652 aaPredicted RBP3.8□□□□□ -1.8
CACUL1-202ENST00000477583 LCP1P13796 627 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 LTBRP36941 435 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 KLF10Q13118 480 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 TESK1Q15569 626 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 KCNT2Q6UVM3 1135 aa3.8□□□□□ -1.8
CACUL1-202ENST00000477583 RALYLQ86SE5 291 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms