RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 RIT2Q99578 217 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 POLR3CQ9BUI4 534 aaPredicted RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 XPO4Q9C0E2 1151 aaKnown RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 THAP9Q9H5L6 903 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 TUFT1Q9NNX1 390 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 RRAGDQ9NQL2 400 aaPredicted RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 BLOC1S4Q9NUP1 217 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 EXOC1Q9NV70 894 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 FANCLQ9NW38 375 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 KCND2Q9NZV8 630 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 IFNKQ9P0W0 207 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 LIMA1Q9UHB6 759 aaKnown RBP7.45□□□□□ -1.22
LDB3-206ENST00000477489 ADAMTS5Q9UNA0 930 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 ITIH6Q6UXX5 1313 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 RPTORQ8N122 1335 aa7.45□□□□□ -1.22
LDB3-206ENST00000477489 KIF2AO00139 706 aaPredicted RBP7.44□□□□□ -1.22
LDB3-206ENST00000477489 MAFGO15525 162 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 OFD1O75665 1012 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 STAM2O75886 525 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 SLURP2P0DP57 97 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 HSPA8P11142 646 aaKnown RBP7.44□□□□□ -1.22
LDB3-206ENST00000477489 VCAM1P19320 739 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 SFPQP23246 707 aaKnown RBP eCLIP7.44□□□□□ -1.22
LDB3-206ENST00000477489 CCNE1P24864 410 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 ZNF76P36508 570 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 SLC19A1P41440 591 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 LRRC63Q05C16 580 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 FMR1Q06787 632 aaKnown RBP eCLIP7.44□□□□□ -1.22
LDB3-206ENST00000477489 EHHADHQ08426 723 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 PPP2R5CQ13362 524 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 TRIM14Q14142 442 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 TPD52L1Q16890 204 aaPredicted RBP7.44□□□□□ -1.22
LDB3-206ENST00000477489 USH1GQ495M9 461 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 CEP55Q53EZ4 464 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 KIAA1755Q5JYT7 1200 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 ANGEL2Q5VTE6 544 aaKnown RBP7.44□□□□□ -1.22
LDB3-206ENST00000477489 FCHSD1Q86WN1 690 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 LRRC8AQ8IWT6 810 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 GRAMD1CQ8IYS0 662 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 SPICE1Q8N0Z3 855 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 GUF1Q8N442 669 aaKnown RBP7.44□□□□□ -1.22
LDB3-206ENST00000477489 SLC5A5Q92911 643 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 KIFC2Q96AC6 838 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 LENG9Q96B70 501 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 CCDC51Q96ER9 411 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 SPSB2Q99619 263 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 SLC6A16Q9GZN6 736 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 CCPG1Q9ULG6 757 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 ZNF536O15090 1300 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 RLFQ13129 1914 aa7.44□□□□□ -1.22
LDB3-206ENST00000477489 PTPRFP10586 1907 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 IGLV3-22A0A075B6J6 115 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 A0A1W2PQC6 194 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 FRMD3A2A2Y4 597 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 PP2D1A8MPX8 630 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 FAM86B1E9PN63 330 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 MEIS1O00470 390 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 IRF6O14896 467 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 PPP1R12BO60237 982 aaPredicted RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 CFBP00751 764 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 TPM2P07951 284 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 TPM1P09493 284 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 FAM86B2P0C5J1 330 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 PTPRAP18433 802 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 PTGS1P23219 599 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 CDC25AP30304 524 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 COPB2P35606 906 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 CCT6AP40227 531 aaKnown RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 ASIC1P78348 528 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 PDE4DQ08499 809 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 SPIRE1Q08AE8 756 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 COG2Q14746 738 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 NOLC1Q14978 699 aaKnown RBP eCLIP7.43□□□□□ -1.22
LDB3-206ENST00000477489 NR1I3Q14994 352 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 PRR16Q569H4 304 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 NBPF12Q5TAG4 269 aaPredicted RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 PCNX4Q63HM2 1172 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 SPECC1LQ69YQ0 1117 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 USP50Q70EL3 339 aaPredicted RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 CCDC65Q8IXS2 484 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 MB21D1Q8N884 522 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 SPC24Q8NBT2 197 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 RDM1Q8NG50 284 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.43□□□□□ -1.22
LDB3-206ENST00000477489 NELFBQ8WX92 580 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 P2RX5Q93086 422 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 WRNIP1Q96S55 665 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 NAA15Q9BXJ9 866 aaKnown RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 BLZF1Q9H2G9 400 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 HOXC10Q9NYD6 342 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 GGA3Q9NZ52 723 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 TMOD4Q9NZQ9 345 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 MAGEC2Q9UBF1 373 aaPredicted RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 ADD3Q9UEY8 706 aaKnown RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 DNM3Q9UQ16 869 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 CTDP1Q9Y5B0 961 aaPredicted RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.43□□□□□ -1.22
LDB3-206ENST00000477489 A0A0G2JMZ2 1700 aa7.43□□□□□ -1.22
LDB3-206ENST00000477489 TNRC18O15417 2968 aaPredicted RBP7.43□□□□□ -1.22
LDB3-206ENST00000477489 PDE4DIPQ5VU43 2346 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms