RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DSEQ9UL01 958 aa6.42□□□□□ -1.38
UBR3-209ENST00000477461 GPR42O15529 346 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 SOD2P04179 222 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 COL6A1P12109 1028 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 ZXDAP98168 799 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 PFKPQ01813 784 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 SURF1Q15526 300 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 CYP4F22Q6NT55 531 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 SPATC1Q76KD6 591 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 SPRED1Q7Z699 444 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.41□□□□□ -1.38
UBR3-209ENST00000477461 PLEKHH3Q7Z736 793 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 KLHL36Q8N4N3 616 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 DTX3Q8N9I9 347 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 WRNIP1Q96S55 665 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 DLL4Q9NR61 685 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 ARHGAP20Q9P2F6 1191 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 PFDN2Q9UHV9 154 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 ZFP69BQ9UJL9 534 aa6.41□□□□□ -1.38
UBR3-209ENST00000477461 MATN3O15232 486 aa6.4□□□□□ -1.38
UBR3-209ENST00000477461 TNFRSF1AP19438 455 aa6.4□□□□□ -1.38
UBR3-209ENST00000477461 ZNF585AQ6P3V2 769 aa6.4□□□□□ -1.38
UBR3-209ENST00000477461 GPR155Q7Z3F1 870 aa6.4□□□□□ -1.38
UBR3-209ENST00000477461 CIR1Q86X95 450 aaPredicted RBP6.4□□□□□ -1.38
UBR3-209ENST00000477461 UHMK1Q8TAS1 419 aaKnown RBP6.4□□□□□ -1.38
UBR3-209ENST00000477461 SH3RF3Q8TEJ3 882 aaPredicted RBP6.4□□□□□ -1.38
UBR3-209ENST00000477461 DVL3Q92997 716 aaPredicted RBP6.4□□□□□ -1.38
UBR3-209ENST00000477461 DEF6Q9H4E7 631 aa6.4□□□□□ -1.38
UBR3-209ENST00000477461 FAM47E-STBD1D6RA91 191 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 ACOT7O00154 380 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 KLHL18O94889 574 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 FSHBP01225 129 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 ENO2P09104 434 aaPredicted RBP6.39□□□□□ -1.39
UBR3-209ENST00000477461 SMAD2Q15796 467 aaKnown RBP6.39□□□□□ -1.39
UBR3-209ENST00000477461 CD276Q5ZPR3 534 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 STYK1Q6J9G0 422 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 PKN3Q6P5Z2 889 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 PALM2Q8IXS6 379 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 LRRC47Q8N1G4 583 aaKnown RBP6.39□□□□□ -1.39
UBR3-209ENST00000477461 TTC9BQ8N6N2 239 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 ST13P5Q8NFI4 369 aaPredicted RBP6.39□□□□□ -1.39
UBR3-209ENST00000477461 TTLL11Q8NHH1 800 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 TACO1Q9BSH4 297 aaKnown RBP6.39□□□□□ -1.39
UBR3-209ENST00000477461 SLC39A2Q9NP94 309 aa6.39□□□□□ -1.39
UBR3-209ENST00000477461 TCRBV5S4A2TA0A5A2 114 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 STK10O94804 968 aaKnown RBP6.38□□□□□ -1.39
UBR3-209ENST00000477461 KNG1P01042 644 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 KCTD1Q719H9 257 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 KISS1RQ969F8 398 aaPredicted RBP6.38□□□□□ -1.39
UBR3-209ENST00000477461 GNRHR2Q96P88 292 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 CDC6Q99741 560 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 ZFYVE21Q9BQ24 234 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 SPATA9Q9BWV2 254 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 C1QTNF3Q9BXJ4 246 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 HSPBP1Q9NZL4 362 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 PTPN22Q9Y2R2 807 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 NUB1Q9Y5A7 615 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 PCDHA8Q9Y5H6 950 aa6.38□□□□□ -1.39
UBR3-209ENST00000477461 U2SURPO15042 1029 aaKnown RBP6.37□□□□□ -1.39
UBR3-209ENST00000477461 IL18BPO95998 194 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 SRGAP2CP0DJJ0 459 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 EPHB4P54760 987 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 FAM209AQ5JX71 171 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 BTBD8Q5XKL5 378 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 Q6ZUG5 572 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.37□□□□□ -1.39
UBR3-209ENST00000477461 SH3RF2Q8TEC5 729 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 ALG1Q9BT22 464 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 KLC2Q9H0B6 622 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 CATSPERZQ9NTU4 200 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 ADAM29Q9UKF5 820 aa6.37□□□□□ -1.39
UBR3-209ENST00000477461 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.36□□□□□ -1.39
UBR3-209ENST00000477461 PDPK1O15530 556 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 AKAP8O43823 692 aaKnown RBP6.36□□□□□ -1.39
UBR3-209ENST00000477461 KRT15P19012 456 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 CDSNQ15517 529 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 HABP4Q5JVS0 413 aaKnown RBP6.36□□□□□ -1.39
UBR3-209ENST00000477461 FOXB2Q5VYV0 432 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 ARHGAP36Q6ZRI8 547 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 MTDHQ86UE4 582 aaKnown RBP6.36□□□□□ -1.39
UBR3-209ENST00000477461 OSTM1Q86WC4 334 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 CKAP2LQ8IYA6 745 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 LRRC37BQ96QE4 947 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 CD248Q9HCU0 757 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 KCND1Q9NSA2 647 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 RIC8BQ9NVN3 520 aa6.36□□□□□ -1.39
UBR3-209ENST00000477461 ZNF839A8K0R7 811 aa6.35□□□□□ -1.39
UBR3-209ENST00000477461 C1QTNF3-AMACRE9PGA6 284 aa6.35□□□□□ -1.39
UBR3-209ENST00000477461 KCNK3O14649 394 aa6.35□□□□□ -1.39
UBR3-209ENST00000477461 SSRP1Q08945 709 aaKnown RBP6.35□□□□□ -1.39
UBR3-209ENST00000477461 MTERF2Q49AM1 385 aa6.35□□□□□ -1.39
UBR3-209ENST00000477461 SLFN13Q68D06 897 aa6.35□□□□□ -1.39
UBR3-209ENST00000477461 RALYLQ86SE5 291 aaKnown RBP6.35□□□□□ -1.39
UBR3-209ENST00000477461 SCUBE1Q8IWY4 988 aa6.35□□□□□ -1.39
UBR3-209ENST00000477461 SLC16A11Q8NCK7 471 aa6.35□□□□□ -1.39
UBR3-209ENST00000477461 WWC2-AS2Q96NR7 200 aa6.35□□□□□ -1.39
UBR3-209ENST00000477461 ESYT3A0FGR9 886 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 FAM90A27PA6NNH2 459 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 H0Y858 1186 aa6.34□□□□□ -1.39
UBR3-209ENST00000477461 ADCY3O60266 1144 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms