RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 PIK3AP1Q6ZUJ8 805 aa14.16□□□□□ -0.14
APTX-220ENST00000476858 BICD2Q8TD16 824 aa14.16□□□□□ -0.14
APTX-220ENST00000476858 DHX38Q92620 1227 aaKnown RBP14.16□□□□□ -0.14
APTX-220ENST00000476858 ZSCAN31Q96LW9 406 aaPredicted RBP14.16□□□□□ -0.14
APTX-220ENST00000476858 EHMT1Q9H9B1 1298 aa14.16□□□□□ -0.14
APTX-220ENST00000476858 DCDC2CA8MYV0 355 aa14.15□□□□□ -0.14
APTX-220ENST00000476858 KIF28PB7ZC32 967 aa14.15□□□□□ -0.14
APTX-220ENST00000476858 MSH4O15457 936 aa14.15□□□□□ -0.14
APTX-220ENST00000476858 PPFIA4O75335 1185 aa14.15□□□□□ -0.14
APTX-220ENST00000476858 MMP1P03956 469 aa14.15□□□□□ -0.14
APTX-220ENST00000476858 TCF7P36402 384 aaPredicted RBP14.15□□□□□ -0.14
APTX-220ENST00000476858 NOC4LQ9BVI4 516 aaKnown RBP14.15□□□□□ -0.14
APTX-220ENST00000476858 WNT8AQ9H1J5 351 aa14.15□□□□□ -0.14
APTX-220ENST00000476858 RNPEPQ9H4A4 650 aa14.15□□□□□ -0.14
APTX-220ENST00000476858 NOP56O00567 594 aaKnown RBP14.14□□□□□ -0.15
APTX-220ENST00000476858 KPNA6O60684 536 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 MARK3P27448 753 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 CCL23P55773 120 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 ACTR2P61160 394 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 NONOQ15233 471 aaKnown RBP eCLIP14.14□□□□□ -0.15
APTX-220ENST00000476858 BRDTQ58F21 947 aaPredicted RBP14.14□□□□□ -0.15
APTX-220ENST00000476858 C9orf50Q5SZB4 431 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 C16orf59Q7L2K0 433 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 NIPA1Q7RTP0 329 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 TEX2Q8IWB9 1127 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 DIS3L2Q8IYB7 885 aaKnown RBP14.14□□□□□ -0.15
APTX-220ENST00000476858 MBOAT7Q96N66 472 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 OSBPL7Q9BZF2 842 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 JPH1Q9HDC5 661 aaPredicted RBP14.14□□□□□ -0.15
APTX-220ENST00000476858 SH2B1Q9NRF2 756 aaPredicted RBP14.14□□□□□ -0.15
APTX-220ENST00000476858 SLC9A2Q9UBY0 812 aa14.14□□□□□ -0.15
APTX-220ENST00000476858 H3BRB1 525 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 IPO5O00410 1097 aaKnown RBP14.13□□□□□ -0.15
APTX-220ENST00000476858 SOX1O00570 391 aaPredicted RBP14.13□□□□□ -0.15
APTX-220ENST00000476858 ST18O60284 1047 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 SMIM10L2AP0DMW4 78 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 SMIM10L2BP0DMW5 78 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 KRT2P35908 639 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 LETM2Q2VYF4 491 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 KRT25Q7Z3Z0 450 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 SCLYQ96I15 445 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 LLPHQ9BRT6 129 aaKnown RBP14.13□□□□□ -0.15
APTX-220ENST00000476858 ZNF577Q9BSK1 485 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 TUT1Q9H6E5 874 aaKnown RBP14.13□□□□□ -0.15
APTX-220ENST00000476858 SETD4Q9NVD3 440 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 GTF2IRD1Q9UHL9 959 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 NFASCO94856 1347 aa14.13□□□□□ -0.15
APTX-220ENST00000476858 CYP3A7-CYP3A51PA0A087WV96 503 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 LGR5O75473 907 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 TIMP1P01033 207 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 ACRP10323 421 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 CSF2RAP15509 400 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 RAG1P15918 1043 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 ATP4AP20648 1035 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 CYP3A7P24462 503 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 USP11P51784 963 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 GPNMBQ14956 572 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 PTGISQ16647 500 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 TCTN1Q2MV58 587 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 TRIM71Q2Q1W2 868 aaKnown RBP14.12□□□□□ -0.15
APTX-220ENST00000476858 HABP4Q5JVS0 413 aaKnown RBP14.12□□□□□ -0.15
APTX-220ENST00000476858 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 ABHD15Q6UXT9 468 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 CCDC60Q8IWA6 550 aaPredicted RBP14.12□□□□□ -0.15
APTX-220ENST00000476858 ETNPPLQ8TBG4 499 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 TRAPPC12Q8WVT3 735 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 SEPT1Q8WYJ6 367 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 WASF1Q92558 559 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 SLC5A5Q92911 643 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 CDHR1Q96JP9 859 aa14.12□□□□□ -0.15
APTX-220ENST00000476858 TRIP12Q14669 1992 aaPredicted RBP14.12□□□□□ -0.15
APTX-220ENST00000476858 CCDC194A0A1B0GVG4 234 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 MAFGO15525 162 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 TREHO43280 583 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 ATG7O95352 703 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 HOXC8P31273 242 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 SCN5AQ14524 2016 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 NBR1Q14596 966 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 SHHQ15465 462 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 UGCGQ16739 394 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 Q4G0T1 1027 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 MCTP2Q6DN12 878 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 TRAF7Q6Q0C0 670 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 RUFY4Q6ZNE9 571 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 SESTD1Q86VW0 696 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 HAS1Q92839 578 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 C8orf76Q96K31 380 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 UBE2OQ9C0C9 1292 aaKnown RBP14.11□□□□□ -0.15
APTX-220ENST00000476858 UNC45AQ9H3U1 944 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 HIPK3Q9H422 1215 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 MROH7Q68CQ1 1323 aa14.11□□□□□ -0.15
APTX-220ENST00000476858 LAMA2P24043 3122 aaKnown RBP14.1□□□□□ -0.15
APTX-220ENST00000476858 LAMA3Q16787 3333 aa14.1□□□□□ -0.15
APTX-220ENST00000476858 IGKV6D-21A0A0A0MT36 114 aa14.1□□□□□ -0.15
APTX-220ENST00000476858 TLR3O15455 904 aaKnown RBP14.1□□□□□ -0.15
APTX-220ENST00000476858 CHMP2AO43633 222 aa14.1□□□□□ -0.15
APTX-220ENST00000476858 PSMD10O75832 226 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms