RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 FAM117BQ6P1L5 589 aa12.11□□□□□ -0.47
PGK1-203ENST00000476531 ALYREFQ86V81 257 aaKnown RBP12.11□□□□□ -0.47
PGK1-203ENST00000476531 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
PGK1-203ENST00000476531 ZNF274Q96GC6 653 aaPredicted RBP12.11□□□□□ -0.47
PGK1-203ENST00000476531 C17orf80Q9BSJ5 609 aa12.11□□□□□ -0.47
PGK1-203ENST00000476531 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
PGK1-203ENST00000476531 KAT14Q9H8E8 782 aa12.11□□□□□ -0.47
PGK1-203ENST00000476531 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
PGK1-203ENST00000476531 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
PGK1-203ENST00000476531 NID2Q14112 1375 aa12.1□□□□□ -0.47
PGK1-203ENST00000476531 ZBTB43O43298 467 aa12.1□□□□□ -0.47
PGK1-203ENST00000476531 LGR5O75473 907 aa12.1□□□□□ -0.47
PGK1-203ENST00000476531 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
PGK1-203ENST00000476531 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
PGK1-203ENST00000476531 CMTR1Q8N1G2 835 aaKnown RBP12.1□□□□□ -0.47
PGK1-203ENST00000476531 NSUN7Q8NE18 718 aaKnown RBP12.1□□□□□ -0.47
PGK1-203ENST00000476531 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.1□□□□□ -0.47
PGK1-203ENST00000476531 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
PGK1-203ENST00000476531 PDCD2LQ9BRP1 358 aa12.1□□□□□ -0.47
PGK1-203ENST00000476531 VAT1LQ9HCJ6 419 aa12.1□□□□□ -0.47
PGK1-203ENST00000476531 SLC12A7Q9Y666 1083 aa12.1□□□□□ -0.47
PGK1-203ENST00000476531 SIP14410 1827 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 WDFY4Q6ZS81 3184 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 PPP1R11O60927 126 aaPredicted RBP12.09□□□□□ -0.47
PGK1-203ENST00000476531 PPFIA4O75335 1185 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 PLEKHA8P1O95397 391 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 CFBP00751 764 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 HSP90AA1P07900 732 aaKnown RBP12.09□□□□□ -0.47
PGK1-203ENST00000476531 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
PGK1-203ENST00000476531 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.47
PGK1-203ENST00000476531 HTRA4P83105 476 aaPredicted RBP12.09□□□□□ -0.47
PGK1-203ENST00000476531 TROAPQ12815 778 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 SLC35G1Q2M3R5 365 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 HSDL1Q3SXM5 330 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 CELF3Q5SZQ8 465 aaKnown RBP12.09□□□□□ -0.47
PGK1-203ENST00000476531 SERINC5Q86VE9 423 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 FAM178BQ8IXR5 827 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 STAG2Q8N3U4 1231 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 FBXO22Q8NEZ5 403 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 IL31RAQ8NI17 732 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 MTMR8Q96EF0 704 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 C16orf70Q9BSU1 422 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 EMSYQ7Z589 1322 aa12.09□□□□□ -0.47
PGK1-203ENST00000476531 RSPH10B2B2RC85 870 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 DHX16O60231 1041 aaKnown RBP12.08□□□□□ -0.48
PGK1-203ENST00000476531 SORBS3O60504 671 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 GGPS1O95749 300 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 AMHP03971 560 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 RSPH10BP0C881 870 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 IL9P15248 144 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 KCNA5P22460 613 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 HOXC8P31273 242 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 FOSBP53539 338 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 SP2Q02086 613 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 PKP1Q13835 747 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 RTN1Q16799 776 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 PLEKHG4Q58EX7 1191 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 VSIG10LQ86VR7 867 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.483e-17■□□□□ 8.4
PGK1-203ENST00000476531 SPATA33Q96N06 139 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 AMNQ9BXJ7 453 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 INSL6Q9Y581 213 aa12.08□□□□□ -0.48
PGK1-203ENST00000476531 DDAH1O94760 285 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 MYCLP12524 364 aaPredicted RBP12.07□□□□□ -0.48
PGK1-203ENST00000476531 FDPSP14324 419 aaKnown RBP12.07□□□□□ -0.48
PGK1-203ENST00000476531 UBA1P22314 1058 aaKnown RBP12.07□□□□□ -0.48
PGK1-203ENST00000476531 GJB2P29033 226 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 THPOP40225 353 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 GRM4Q14833 912 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 PGM5Q15124 567 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 NTRK3Q16288 839 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 KCNV1Q6PIU1 500 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 MYOCDQ8IZQ8 938 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 GJD3Q8N144 294 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 FANCBQ8NB91 859 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 NEK9Q8TD19 979 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 PHKBQ93100 1093 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 MRPL38Q96DV4 380 aaKnown RBP12.07□□□□□ -0.48
PGK1-203ENST00000476531 INTS4Q96HW7 963 aaKnown RBP12.07□□□□□ -0.48
PGK1-203ENST00000476531 BCAS3Q9H6U6 928 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 MAP3K20Q9NYL2 800 aaKnown RBP12.07□□□□□ -0.48
PGK1-203ENST00000476531 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
PGK1-203ENST00000476531 COL4A6Q14031 1691 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 C17orf102A2RUQ5 167 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 ZBTB5O15062 677 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 HOXA13P31271 388 aaPredicted RBP12.06□□□□□ -0.48
PGK1-203ENST00000476531 FUT2Q10981 343 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 EPC2Q52LR7 807 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 PTCRAQ6ISU1 281 aaPredicted RBP12.06□□□□□ -0.48
PGK1-203ENST00000476531 SYNE3Q6ZMZ3 975 aa12.06□□□□□ -0.48
PGK1-203ENST00000476531 CCDC82Q8N4S0 544 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms