RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 H3BRB1 525 aa23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 MSH4O15457 936 aa23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 SAFBQ15424 915 aaKnown RBP eCLIP23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 LETM2Q2VYF4 491 aa23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 TRIM50Q86XT4 487 aa23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 TUT1Q9H6E5 874 aaKnown RBP23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 TBC1D22BQ9NU19 505 aa23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 TRMT13Q9NUP7 481 aaKnown RBP23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 HDAC6Q9UBN7 1215 aa23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 TBX21Q9UL17 535 aa23.8■■□□□ 1.4
MAP1LC3A-204ENST00000476428 A0A0C4DFX4 3053 aa23.79■■□□□ 1.4
MAP1LC3A-204ENST00000476428 CCNE2O96020 404 aa23.79■■□□□ 1.4
MAP1LC3A-204ENST00000476428 ITGB8P26012 769 aa23.79■■□□□ 1.4
MAP1LC3A-204ENST00000476428 ACTR2P61160 394 aa23.79■■□□□ 1.4
MAP1LC3A-204ENST00000476428 SESTD1Q86VW0 696 aa23.79■■□□□ 1.4
MAP1LC3A-204ENST00000476428 PRO3102Q9H379 93 aa23.79■■□□□ 1.4
MAP1LC3A-204ENST00000476428 ATG7O95352 703 aa23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 GJB2P29033 226 aa23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 MAGEA10P43363 369 aaPredicted RBP23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 CUL4AQ13619 759 aa23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 C7orf31Q8N865 590 aa23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 SLC5A5Q92911 643 aa23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 PCYT2Q99447 389 aa23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 DDX25Q9UHL0 483 aaKnown RBP23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 SMC3Q9UQE7 1217 aa23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.78■■□□□ 1.4
MAP1LC3A-204ENST00000476428 SUPT20HL2P0C7V6 817 aa23.77■■□□□ 1.4
MAP1LC3A-204ENST00000476428 MDM2Q00987 491 aaPredicted RBP23.77■■□□□ 1.4
MAP1LC3A-204ENST00000476428 PPP4R3AQ6IN85 833 aa23.77■■□□□ 1.4
MAP1LC3A-204ENST00000476428 GDF6Q6KF10 455 aaPredicted RBP23.77■■□□□ 1.4
MAP1LC3A-204ENST00000476428 GJA10Q969M2 543 aa23.77■■□□□ 1.4
MAP1LC3A-204ENST00000476428 GDF15Q99988 308 aa23.77■■□□□ 1.4
MAP1LC3A-204ENST00000476428 GTF2IRD1Q9UHL9 959 aa23.77■■□□□ 1.4
MAP1LC3A-204ENST00000476428 KIF3AQ9Y496 699 aa23.77■■□□□ 1.4
MAP1LC3A-204ENST00000476428 SCN10AQ9Y5Y9 1956 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SLC37A4O43826 429 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 CCNT1O60563 726 aaKnown RBP23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 LGR5O75473 907 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 RAG1P15918 1043 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 GCFC2P16383 781 aaKnown RBP23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 ABHD15Q6UXT9 468 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 BADQ92934 168 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 RIT2Q99578 217 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 LBHD1Q9BQE6 289 aaPredicted RBP23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 FOXP1Q9H334 677 aaPredicted RBP23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SMARCAD1Q9H4L7 1026 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 ZNF215Q9UL58 517 aaPredicted RBP23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 MYH7BA7E2Y1 1941 aa23.76■■□□□ 1.39
MAP1LC3A-204ENST00000476428 TIMP1P01033 207 aa23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 CYP2C9P11712 490 aa23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 HIC1Q14526 733 aa23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 PTGISQ16647 500 aa23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 ZNF746Q6NUN9 644 aaPredicted RBP23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 ETNPPLQ8TBG4 499 aa23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 GLG1Q92896 1179 aa23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 NAP1L4Q99733 375 aaKnown RBP23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 RNPEPQ9H4A4 650 aa23.75■■□□□ 1.39
MAP1LC3A-204ENST00000476428 PSMD10O75832 226 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SMIM10L2AP0DMW4 78 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SMIM10L2BP0DMW5 78 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 ZNF200P98182 395 aaPredicted RBP23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 KRT76Q01546 638 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 LRCH2Q5VUJ6 765 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SNX21Q969T3 373 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 CTAGE1Q96RT6 745 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 PPP1R12CQ9BZL4 782 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 AZI2Q9H6S1 392 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 EMSYQ7Z589 1322 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 COL6A3P12111 3177 aa23.74■■□□□ 1.39
MAP1LC3A-204ENST00000476428 IGKV6D-21A0A0A0MT36 114 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 KIF28PB7ZC32 967 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 K7ELQ4 463 aaPredicted RBP23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 WNT7AO00755 349 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 GAS7O60861 476 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 MARK3P27448 753 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 STAT5BP51692 787 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 MIS18BP1Q6P0N0 1132 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 NOC4LQ9BVI4 516 aaKnown RBP23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 TEKT3Q9BXF9 490 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 HIPK3Q9H422 1215 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 KCNMB3Q9NPA1 279 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 ERAP1Q9NZ08 941 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 NOD1Q9Y239 953 aa23.73■■□□□ 1.39
MAP1LC3A-204ENST00000476428 CYP2C18P33260 490 aa23.72■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SWSAP1Q6NVH7 229 aa23.72■■□□□ 1.39
MAP1LC3A-204ENST00000476428 PLPPR4Q7Z2D5 763 aa23.72■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SMAP1Q8IYB5 467 aaPredicted RBP23.72■■□□□ 1.39
MAP1LC3A-204ENST00000476428 UNC45AQ9H3U1 944 aa23.72■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SETD4Q9NVD3 440 aa23.72■■□□□ 1.39
MAP1LC3A-204ENST00000476428 TCEAL9Q9UHQ7 104 aa23.72■■□□□ 1.39
MAP1LC3A-204ENST00000476428 UMODL1Q5DID0 1318 aa23.72■■□□□ 1.39
MAP1LC3A-204ENST00000476428 DOCK5Q9H7D0 1870 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 C17orf102A2RUQ5 167 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 SOX1O00570 391 aaPredicted RBP23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 BACH1O14867 736 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 ATP2B1P20020 1258 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 U2AF2P26368 475 aaKnown RBP eCLIP23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 HOXC8P31273 242 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 BMP8BP34820 402 aa23.71■■□□□ 1.39
MAP1LC3A-204ENST00000476428 GNL2Q13823 731 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms