RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TUBBP07437 444 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 CCDC170Q8IYT3 715 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 OLIG1Q8TAK6 271 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 LMBR1Q8WVP7 490 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 TRIM47Q96LD4 638 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 PYM1Q9BRP8 204 aaKnown RBP9.22□□□□□ -0.93
VAPB-205ENST00000476395 TLR10Q9BXR5 811 aa9.22□□□□□ -0.93
VAPB-205ENST00000476395 CRNKL1Q9BZJ0 848 aaKnown RBP9.22□□□□□ -0.93
VAPB-205ENST00000476395 GOLGA6L7A0A1B0GV03 622 aa9.21□□□□□ -0.93
VAPB-205ENST00000476395 PPP1R11O60927 126 aaPredicted RBP9.21□□□□□ -0.93
VAPB-205ENST00000476395 LGR5O75473 907 aa9.21□□□□□ -0.93
VAPB-205ENST00000476395 CALML3P27482 149 aa9.21□□□□□ -0.93
VAPB-205ENST00000476395 HIBADHP31937 336 aaKnown RBP9.21□□□□□ -0.93
VAPB-205ENST00000476395 GPR101Q96P66 508 aaPredicted RBP9.21□□□□□ -0.93
VAPB-205ENST00000476395 NUP58Q9BVL2 599 aa9.21□□□□□ -0.93
VAPB-205ENST00000476395 SLC39A2Q9NP94 309 aa9.21□□□□□ -0.93
VAPB-205ENST00000476395 PCDHA2Q9Y5H9 948 aa9.21□□□□□ -0.93
VAPB-205ENST00000476395 MAP3K13O43283 966 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 MOCS3O95396 460 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 ERCC3P19447 782 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 SCTRP47872 440 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 RPS8P62241 208 aaKnown RBP9.21□□□□□ -0.94
VAPB-205ENST00000476395 VPS72Q15906 364 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 ANKRD20A8PQ5CZ79 823 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 KLHDC7AQ5VTJ3 777 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 CCDC121Q6ZUS5 278 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 CABP7Q86V35 215 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
VAPB-205ENST00000476395 TATDN2Q93075 761 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 FRMD4BQ9Y2L6 1034 aa9.21□□□□□ -0.94
VAPB-205ENST00000476395 PHF20L1A8MW92 1017 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 RBAK-RBAKDNI3L0D1 243 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 PJA2O43164 708 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 TECP42680 631 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 NFIXQ14938 502 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 MICAL1Q8TDZ2 1067 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 GJA10Q969M2 543 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 SPZ1Q9BXG8 430 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 YIPF3Q9GZM5 350 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 KDM4CQ9H3R0 1056 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 LEMD3Q9Y2U8 911 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 PCDHA13Q9Y5I0 950 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 LRRC53A6NM62 1247 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
VAPB-205ENST00000476395 LAD1O00515 517 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 CAND2O75155 1236 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 OR52Z1P0C646 297 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 EZRP15311 586 aaKnown RBP9.2□□□□□ -0.94
VAPB-205ENST00000476395 MDH1P40925 334 aaKnown RBP9.2□□□□□ -0.94
VAPB-205ENST00000476395 RHBDL3P58872 404 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 ITIH3Q06033 890 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 PDE4DQ08499 809 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 CNNM4Q6P4Q7 775 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 USP17L2Q6R6M4 530 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 TMC4Q7Z404 712 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 HEATR3Q7Z4Q2 680 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 FMNL3Q8IVF7 1028 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 RETREG2Q8NC44 543 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 CXorf38Q8TB03 319 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 GGT7Q9UJ14 662 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 USP21Q9UK80 565 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 OPA1O60313 960 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 PRLRP16471 622 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 PPP4CP60510 307 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 PTPROQ16827 1216 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 KDM7AQ6ZMT4 941 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
VAPB-205ENST00000476395 TCP11Q8WWU5 503 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 DNAJC19Q96DA6 116 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 CNOT8Q9UFF9 292 aaKnown RBP9.2□□□□□ -0.94
VAPB-205ENST00000476395 PPME1Q9Y570 386 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 NRXN2Q9P2S2 1712 aa9.2□□□□□ -0.94
VAPB-205ENST00000476395 A0A1B0GUA9 196 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 KLHL33A6NCF5 533 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 PSMA7O14818 248 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 CCNT1O60563 726 aaKnown RBP9.19□□□□□ -0.94
VAPB-205ENST00000476395 FAM107AO95990 144 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 MCM3P25205 808 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 ECHS1P30084 290 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 EIF4A3P38919 411 aaKnown RBP9.19□□□□□ -0.94
VAPB-205ENST00000476395 KIF11P52732 1056 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 VWA3BQ502W6 1294 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 HIBCHQ6NVY1 386 aaPredicted RBP9.19□□□□□ -0.94
VAPB-205ENST00000476395 HAS1Q92839 578 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 OSBPL9Q96SU4 736 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 FAM167BQ9BTA0 163 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 STIM2Q9P246 746 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 KIF5BP33176 963 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
VAPB-205ENST00000476395 GUCY2DQ02846 1103 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 ITGB3BPQ13352 177 aaPredicted RBP9.19□□□□□ -0.94
VAPB-205ENST00000476395 TMEM119Q4V9L6 283 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 BICDL1Q6ZP65 573 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 MAATS1Q7Z4T9 603 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 IQCKQ8N0W5 287 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 SDR16C5Q8N3Y7 309 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 TBCKQ8TEA7 893 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 AK8Q96MA6 479 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 ZNF570Q96NI8 536 aa9.19□□□□□ -0.94
VAPB-205ENST00000476395 TACO1Q9BSH4 297 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms