RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	DAGLB	Q8NCG7	672 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	CAGE1	Q8TC20	777 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	SEPT1	Q8WYJ6	367 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	GTF3C6	Q969F1	213 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	PCYT2	Q99447	389 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	RNPEP	Q9H4A4	650 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	PCDHA4	Q9UN74	947 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	CIITA	P33076	1130 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	PTK7	Q13308	1070 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	BFSP2	Q13515	415 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	GPNMB	Q14956	572 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	FAM109B	Q6ICB4	259 aa	Predicted RBP	18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	TRAF7	Q6Q0C0	670 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	FAM177A1	Q8N128	213 aa	Predicted RBP	18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	HERVK_113	Q902F9	699 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	LENG9	Q96B70	501 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	SLC9A2	Q9UBY0	812 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	ZNF215	Q9UL58	517 aa	Predicted RBP	18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	TET1	Q8NFU7	2136 aa		18.85	■□□□□ 0.61
VPS8-222	ENST00000475580	EMSY	Q7Z589	1322 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	C17orf102	A2RUQ5	167 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	RBAK-RBAKDN	I3L0D1	243 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	DHX15	O43143	795 aa	Known RBP	18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	LGR5	O75473	907 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	FGB	P02675	491 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	FDPS	P14324	419 aa	Known RBP	18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	ADAM17	P78536	824 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	SMAD3	P84022	425 aa	Known RBP	18.84	■□□□□ 0.61
VPS8-222	ENST00000475580		Q7L0L9	218 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	SERINC5	Q86VE9	423 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	BLID	Q8IZY5	108 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	RETREG2	Q8NC44	543 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	AFAP1L1	Q8TED9	768 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	SDF4	Q9BRK5	362 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	GJB4	Q9NTQ9	266 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	SETD4	Q9NVD3	440 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	KCNJ14	Q9UNX9	436 aa		18.84	■□□□□ 0.61
VPS8-222	ENST00000475580	TREH	O43280	583 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	ATG7	O95352	703 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	CCNE2	O96020	404 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	CKB	P12277	381 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	RFC2	P35250	354 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	ACTR2	P61160	394 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	DEFB128	Q7Z7B8	93 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	RPUSD2	Q8IZ73	545 aa	Known RBP	18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	CCDC155	Q8N6L0	562 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	UIMC1	Q96RL1	719 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	PHF20	Q9BVI0	1012 aa		18.83	■□□□□ 0.6
VPS8-222	ENST00000475580	PFKM	P08237	780 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	SELP	P16109	830 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	RBM25	P49756	843 aa	Known RBP	18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	SET	Q01105	290 aa	Predicted RBP	18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	GALNT17	Q6IS24	598 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	LRRC8D	Q7L1W4	858 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	OTOP2	Q7RTS6	562 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	NSUN7	Q8NE18	718 aa	Known RBP	18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	TBCK	Q8TEA7	893 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	LMBR1	Q8WVP7	490 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	ATP6V0A1	Q93050	837 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	C22orf23	Q9BZE7	217 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	ERAP1	Q9NZ08	941 aa		18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	ORC3	Q9UBD5	711 aa	Predicted RBP	18.82	■□□□□ 0.6
VPS8-222	ENST00000475580	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	GRXCR1	A8MXD5	290 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	DDX39A	O00148	427 aa	Known RBP	18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	IPO5	O00410	1097 aa	Known RBP	18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	MARK3	P27448	753 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	USP11	P51784	963 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	PRR16	Q569H4	304 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	ZNF618	Q5T7W0	954 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	DEFB123	Q8N688	67 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	ZNF577	Q9BSK1	485 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	SMARCAD1	Q9H4L7	1026 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	KAT6A	Q92794	2004 aa		18.81	■□□□□ 0.6
VPS8-222	ENST00000475580	IGKV6D-21	A0A0A0MT36	114 aa		18.8	■□□□□ 0.6
VPS8-222	ENST00000475580	JAK2	O60674	1132 aa		18.8	■□□□□ 0.6
VPS8-222	ENST00000475580	NBN	O60934	754 aa		18.8	■□□□□ 0.6
VPS8-222	ENST00000475580	MBTPS1	Q14703	1052 aa		18.8	■□□□□ 0.6
VPS8-222	ENST00000475580	ABHD15	Q6UXT9	468 aa		18.8	■□□□□ 0.6
VPS8-222	ENST00000475580	GLG1	Q92896	1179 aa		18.8	■□□□□ 0.6
VPS8-222	ENST00000475580	LAMA2	P24043	3122 aa	Known RBP	18.8	■□□□□ 0.6
VPS8-222	ENST00000475580	NRCAM	Q92823	1304 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	MSH4	O15457	936 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	CXCL10	P02778	98 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	PLCB4	Q15147	1175 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	TCTN1	Q2MV58	587 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	PLPPR4	Q7Z2D5	763 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	OXER1	Q8TDS5	423 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	MBOAT7	Q96N66	472 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	TBC1D22B	Q9NU19	505 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	MTMR10	Q9NXD2	777 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	LIMCH1	Q9UPQ0	1083 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	GBF1	Q92538	1859 aa		18.79	■□□□□ 0.6
VPS8-222	ENST00000475580	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.78	■□□□□ 0.6
VPS8-222	ENST00000475580	TDP2	O95551	362 aa		18.78	■□□□□ 0.6
VPS8-222	ENST00000475580	GNAT1	P11488	350 aa		18.78	■□□□□ 0.6
VPS8-222	ENST00000475580	CYP3A7	P24462	503 aa		18.78	■□□□□ 0.6
VPS8-222	ENST00000475580	THPO	P40225	353 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms