RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 IFIH1Q9BYX4 1025 aaKnown RBP28.67■■■□□ 2.18
TMEM54-205ENST00000475208 PLEKHA8P1O95397 391 aa28.66■■■□□ 2.18
TMEM54-205ENST00000475208 GIMAP8Q8ND71 665 aaPredicted RBP28.66■■■□□ 2.18
TMEM54-205ENST00000475208 LZTS2Q9BRK4 669 aa28.66■■■□□ 2.18
TMEM54-205ENST00000475208 SUPT16HQ9Y5B9 1047 aaKnown RBP28.66■■■□□ 2.18
TMEM54-205ENST00000475208 NRCAMQ92823 1304 aa28.66■■■□□ 2.18
TMEM54-205ENST00000475208 PRC1O43663 620 aa28.65■■■□□ 2.18
TMEM54-205ENST00000475208 GNAQP50148 359 aa28.65■■■□□ 2.18
TMEM54-205ENST00000475208 TIGD5Q53EQ6 642 aa28.65■■■□□ 2.18
TMEM54-205ENST00000475208 NFXL1Q6ZNB6 911 aa28.65■■■□□ 2.18
TMEM54-205ENST00000475208 SRBD1Q8N5C6 995 aaKnown RBP28.65■■■□□ 2.18
TMEM54-205ENST00000475208 FAM122AQ96E09 287 aa28.65■■■□□ 2.18
TMEM54-205ENST00000475208 CD320Q9NPF0 282 aa28.65■■■□□ 2.18
TMEM54-205ENST00000475208 H3BNC9 293 aa28.64■■■□□ 2.18
TMEM54-205ENST00000475208 TCF7P36402 384 aaPredicted RBP28.64■■■□□ 2.18
TMEM54-205ENST00000475208 GPM6BQ13491 265 aa28.64■■■□□ 2.18
TMEM54-205ENST00000475208 TMEM31Q5JXX7 168 aa28.64■■■□□ 2.18
TMEM54-205ENST00000475208 TMEM192Q8IY95 271 aa28.64■■■□□ 2.18
TMEM54-205ENST00000475208 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.64■■■□□ 2.18
TMEM54-205ENST00000475208 GPRASP2Q96D09 838 aa28.64■■■□□ 2.18
TMEM54-205ENST00000475208 MTA3Q9BTC8 594 aa28.64■■■□□ 2.18
TMEM54-205ENST00000475208 ATP9AO75110 1047 aa28.63■■■□□ 2.17
TMEM54-205ENST00000475208 CHRNA1P02708 482 aa28.63■■■□□ 2.17
TMEM54-205ENST00000475208 KCNA2P16389 499 aa28.63■■■□□ 2.17
TMEM54-205ENST00000475208 RUFY4Q6ZNE9 571 aa28.63■■■□□ 2.17
TMEM54-205ENST00000475208 CMTR1Q8N1G2 835 aaKnown RBP28.63■■■□□ 2.17
TMEM54-205ENST00000475208 CDHR1Q96JP9 859 aa28.63■■■□□ 2.17
TMEM54-205ENST00000475208 PSTPIP2Q9H939 334 aa28.63■■■□□ 2.17
TMEM54-205ENST00000475208 NLRC5Q86WI3 1866 aa28.62■■■□□ 2.17
TMEM54-205ENST00000475208 CCDC69A6NI79 296 aa28.62■■■□□ 2.17
TMEM54-205ENST00000475208 SH2B2O14492 632 aaPredicted RBP28.62■■■□□ 2.17
TMEM54-205ENST00000475208 GHRP10912 638 aa28.62■■■□□ 2.17
TMEM54-205ENST00000475208 RXRAP19793 462 aa28.62■■■□□ 2.17
TMEM54-205ENST00000475208 PPFIA1Q13136 1202 aa28.62■■■□□ 2.17
TMEM54-205ENST00000475208 TAF2Q6P1X5 1199 aa28.62■■■□□ 2.17
TMEM54-205ENST00000475208 BANK1Q8NDB2 785 aa28.62■■■□□ 2.17
TMEM54-205ENST00000475208 IL9P15248 144 aa28.61■■■□□ 2.17
TMEM54-205ENST00000475208 ITGB5P18084 799 aa28.61■■■□□ 2.17
TMEM54-205ENST00000475208 MARK3P27448 753 aa28.61■■■□□ 2.17
TMEM54-205ENST00000475208 MCM5P33992 734 aa28.61■■■□□ 2.17
TMEM54-205ENST00000475208 PTCRAQ6ISU1 281 aaPredicted RBP28.61■■■□□ 2.17
TMEM54-205ENST00000475208 RPAINQ86UA6 219 aa28.61■■■□□ 2.17
TMEM54-205ENST00000475208 FAM178BQ8IXR5 827 aa28.61■■■□□ 2.17
TMEM54-205ENST00000475208 SEPT1Q8WYJ6 367 aa28.61■■■□□ 2.17
TMEM54-205ENST00000475208 TMEM87BQ96K49 555 aa28.61■■■□□ 2.17
TMEM54-205ENST00000475208 KAT6AQ92794 2004 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 RALGAPA2Q2PPJ7 1873 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 COL9A3Q14050 684 aaPredicted RBP28.6■■■□□ 2.17
TMEM54-205ENST00000475208 UBE2SQ16763 222 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 TMTC2Q8N394 836 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 IL17RAQ96F46 866 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 C11orf16Q9NQ32 467 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 ERAP1Q9NZ08 941 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 PKD2L1Q9P0L9 805 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 HCN4Q9Y3Q4 1203 aa28.6■■■□□ 2.17
TMEM54-205ENST00000475208 GSTTP1A0A1W2PQM5 241 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 FAM86C2PA6NEL3 165 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 MGAT3Q09327 533 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 GRIK4Q16099 956 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 TCEAL5Q5H9L2 206 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 RSPH3Q86UC2 560 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 RAB11FIP4Q86YS3 637 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 FIBCD1Q8N539 461 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 NEK9Q8TD19 979 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 EHMT1Q9H9B1 1298 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 TUBE1Q9UJT0 475 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 UBIAD1Q9Y5Z9 338 aa28.59■■■□□ 2.17
TMEM54-205ENST00000475208 hCG_1642624A0A1W2PR95 340 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 H3BQ06 376 aaPredicted RBP28.58■■■□□ 2.17
TMEM54-205ENST00000475208 GPR37L1O60883 481 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 CALM1P0DP23 149 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 CALM2P0DP24 149 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 CALM3P0DP25 149 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 CTNNB1P35222 781 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 MTMR1Q13613 665 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 LPIN1Q14693 890 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 GJD3Q8N144 294 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 GLG1Q92896 1179 aa28.58■■■□□ 2.17
TMEM54-205ENST00000475208 NSUN3Q9H649 340 aaKnown RBP28.58■■■□□ 2.17
TMEM54-205ENST00000475208 GRXCR2A6NFK2 248 aa28.57■■■□□ 2.16
TMEM54-205ENST00000475208 SPDYE3A6NKU9 549 aa28.57■■■□□ 2.16
TMEM54-205ENST00000475208 PI4K2BG5E9Z4 385 aa28.57■■■□□ 2.16
TMEM54-205ENST00000475208 LIFRP42702 1097 aa28.57■■■□□ 2.16
TMEM54-205ENST00000475208 IRX6P78412 446 aaPredicted RBP28.57■■■□□ 2.16
TMEM54-205ENST00000475208 LSG1Q9H089 658 aaKnown RBP28.57■■■□□ 2.16
TMEM54-205ENST00000475208 MBLAC1A4D2B0 266 aaPredicted RBP28.56■■■□□ 2.16
TMEM54-205ENST00000475208 SLC27A2O14975 620 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 SSTR3P32745 418 aaPredicted RBP28.56■■■□□ 2.16
TMEM54-205ENST00000475208 PUS10Q3MIT2 529 aaKnown RBP28.56■■■□□ 2.16
TMEM54-205ENST00000475208 ADGRA3Q8IWK6 1321 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 CCDC82Q8N4S0 544 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 DNAJB3Q8WWF6 145 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 PABPC5Q96DU9 382 aaKnown RBP28.56■■■□□ 2.16
TMEM54-205ENST00000475208 SMARCAD1Q9H4L7 1026 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 JADE2Q9NQC1 790 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 PCDHA6Q9UN73 950 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 PCDHA8Q9Y5H6 950 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 SLC12A7Q9Y666 1083 aa28.56■■■□□ 2.16
TMEM54-205ENST00000475208 IGBP1P78318 339 aa28.55■■■□□ 2.16
TMEM54-205ENST00000475208 FBXO47Q5MNV8 452 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms