RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 BRMS1Q9HCU9 246 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 HDAC6Q9UBN7 1215 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 FAM205CA6NFA0 338 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 BTBD18B2RXH4 712 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 TDP2O95551 362 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 RAG1P15918 1043 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 GUCY1B3Q02153 619 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 Q4G0T1 1027 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 GDF6Q6KF10 455 aaPredicted RBP18.41■□□□□ 0.54
SRM-204ENST00000475189 MOXD1Q6UVY6 613 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 DIS3L2Q8IYB7 885 aaKnown RBP18.41■□□□□ 0.54
SRM-204ENST00000475189 FAM184AQ8NB25 1140 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 BADQ92934 168 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 C8orf76Q96K31 380 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 LBHD1Q9BQE6 289 aaPredicted RBP18.41■□□□□ 0.54
SRM-204ENST00000475189 TBC1D22BQ9NU19 505 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 GTF2IRD1Q9UHL9 959 aa18.41■□□□□ 0.54
SRM-204ENST00000475189 MYH9P35579 1960 aaKnown RBP18.41■□□□□ 0.54
SRM-204ENST00000475189 DDX39AO00148 427 aaKnown RBP18.4■□□□□ 0.54
SRM-204ENST00000475189 MSH4O15457 936 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 ATG7O95352 703 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 CCNE2O96020 404 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 TIMP1P01033 207 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 SUPT20HL2P0C7V6 817 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 BMP8BP34820 402 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 ACTR2P61160 394 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 LETM2Q2VYF4 491 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 NEK8Q86SG6 692 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 C7orf31Q8N865 590 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 CTAGE1Q96RT6 745 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 PCYT2Q99447 389 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 TRIOBPQ9H2D6 2365 aa18.4■□□□□ 0.54
SRM-204ENST00000475189 LGR5O75473 907 aa18.39■□□□□ 0.53
SRM-204ENST00000475189 CYP2C9P11712 490 aa18.39■□□□□ 0.53
SRM-204ENST00000475189 HIC1Q14526 733 aa18.39■□□□□ 0.53
SRM-204ENST00000475189 PTGISQ16647 500 aa18.39■□□□□ 0.53
SRM-204ENST00000475189 FBXO18Q8NFZ0 1043 aa18.39■□□□□ 0.53
SRM-204ENST00000475189 NOC4LQ9BVI4 516 aaKnown RBP18.39■□□□□ 0.53
SRM-204ENST00000475189 PPP1R12CQ9BZL4 782 aa18.39■□□□□ 0.53
SRM-204ENST00000475189 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
SRM-204ENST00000475189 EMSYQ7Z589 1322 aa18.39■□□□□ 0.53
SRM-204ENST00000475189 SMIM10L2AP0DMW4 78 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 SMIM10L2BP0DMW5 78 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 CYP2C18P33260 490 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 HABP4Q5JVS0 413 aaKnown RBP18.38■□□□□ 0.53
SRM-204ENST00000475189 PPP4R3AQ6IN85 833 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 ABHD15Q6UXT9 468 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 SLC5A5Q92911 643 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 UBE2OQ9C0C9 1292 aaKnown RBP18.38■□□□□ 0.53
SRM-204ENST00000475189 HIPK3Q9H422 1215 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 RNPEPQ9H4A4 650 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 SMARCAD1Q9H4L7 1026 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 DDX25Q9UHL0 483 aaKnown RBP18.38■□□□□ 0.53
SRM-204ENST00000475189 UMODL1Q5DID0 1318 aa18.38■□□□□ 0.53
SRM-204ENST00000475189 IGKV6D-21A0A0A0MT36 114 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 SLC37A4O43826 429 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 GCFC2P16383 781 aaKnown RBP18.37■□□□□ 0.53
SRM-204ENST00000475189 HOXC8P31273 242 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 ZNF200P98182 395 aaPredicted RBP18.37■□□□□ 0.53
SRM-204ENST00000475189 SAFBQ15424 915 aaKnown RBP eCLIP18.37■□□□□ 0.53
SRM-204ENST00000475189 MFSD5Q6N075 450 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 ZNF746Q6NUN9 644 aaPredicted RBP18.37■□□□□ 0.53
SRM-204ENST00000475189 ETNPPLQ8TBG4 499 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 GLG1Q92896 1179 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 GJA10Q969M2 543 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 RIT2Q99578 217 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 ERAP1Q9NZ08 941 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 NOD1Q9Y239 953 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 SCN5AQ14524 2016 aa18.37■□□□□ 0.53
SRM-204ENST00000475189 C17orf102A2RUQ5 167 aa18.36■□□□□ 0.53
SRM-204ENST00000475189 CCNT1O60563 726 aaKnown RBP18.36■□□□□ 0.53
SRM-204ENST00000475189 PSMD10O75832 226 aa18.36■□□□□ 0.53
SRM-204ENST00000475189 GJB2P29033 226 aa18.36■□□□□ 0.53
SRM-204ENST00000475189 KRT76Q01546 638 aa18.36■□□□□ 0.53
SRM-204ENST00000475189 CUL4AQ13619 759 aa18.36■□□□□ 0.53
SRM-204ENST00000475189 PLPPR4Q7Z2D5 763 aa18.36■□□□□ 0.53
SRM-204ENST00000475189 NAP1L4Q99733 375 aaKnown RBP18.36■□□□□ 0.53
SRM-204ENST00000475189 AZI2Q9H6S1 392 aa18.36■□□□□ 0.53
SRM-204ENST00000475189 GAS7O60861 476 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 MARK3P27448 753 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 STAT5BP51692 787 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 FPGSQ05932 587 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 LRCH2Q5VUJ6 765 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 CCDC60Q8IWA6 550 aaPredicted RBP18.35■□□□□ 0.53
SRM-204ENST00000475189 SMAP1Q8IYB5 467 aaPredicted RBP18.35■□□□□ 0.53
SRM-204ENST00000475189 DHX38Q92620 1227 aaKnown RBP18.35■□□□□ 0.53
SRM-204ENST00000475189 TEKT3Q9BXF9 490 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 WNT8AQ9H1J5 351 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 FOXP1Q9H334 677 aaPredicted RBP18.35■□□□□ 0.53
SRM-204ENST00000475189 SETD4Q9NVD3 440 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 KIF3AQ9Y496 699 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
SRM-204ENST00000475189 RANBP2P49792 3224 aaKnown RBP18.35■□□□□ 0.53
SRM-204ENST00000475189 TANC1Q9C0D5 1861 aa18.35■□□□□ 0.53
SRM-204ENST00000475189 A0A1W2PPC1 479 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 WNT7AO00755 349 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 EPHB4P54760 987 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 CCL23P55773 120 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 ADAM17P78536 824 aa18.34■□□□□ 0.53
SRM-204ENST00000475189 PTK7Q13308 1070 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms