RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 PRPF40AO75400 957 aaKnown RBP11.29□□□□□ -0.6
COL8A1-206ENST00000474648 GGPS1O95749 300 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 HMGCRP04035 888 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-206ENST00000474648 GRK4P32298 578 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 ME1P48163 572 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 TNFAIP2Q03169 654 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 ARHGAP1Q07960 439 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 PPP2R5CQ13362 524 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 NEDD9Q14511 834 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 DUSP28Q4G0W2 176 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 CELF3Q5SZQ8 465 aaKnown RBP11.29□□□□□ -0.6
COL8A1-206ENST00000474648 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-206ENST00000474648 ADALQ6DHV7 355 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 USP49Q70CQ1 688 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 CYFIP1Q7L576 1253 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 GBP4Q96PP9 640 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 TEKT3Q9BXF9 490 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 LMBRD1Q9NUN5 540 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 GNEQ9Y223 722 aaKnown RBP11.29□□□□□ -0.6
COL8A1-206ENST00000474648 PP2D1A8MPX8 630 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 DDX39AO00148 427 aaKnown RBP11.28□□□□□ -0.6
COL8A1-206ENST00000474648 SORBS3O60504 671 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 GAS7O60861 476 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-206ENST00000474648 ATG7O95352 703 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 INHAP05111 366 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 CDC25AP30304 524 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 MCM4P33991 863 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
COL8A1-206ENST00000474648 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 METTL7BQ6UX53 244 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 GIMAP8Q8ND71 665 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-206ENST00000474648 SH3TC2Q8TF17 1288 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-206ENST00000474648 EPSTI1Q96J88 318 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 SDF4Q9BRK5 362 aa11.28□□□□□ -0.6
COL8A1-206ENST00000474648 MMTAG2Q9BU76 263 aaKnown RBP11.28□□□□□ -0.6
COL8A1-206ENST00000474648 FAM237AA0A1B0GTK4 181 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 GSTTP1A0A1W2PQM5 241 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 POTEMA6NI47 508 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 NKRFO15226 690 aaKnown RBP eCLIP11.27□□□□□ -0.61
COL8A1-206ENST00000474648 SEPT4O43236 478 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 GH1P01241 217 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 AKR1A1P14550 325 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 CMA1P23946 247 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 ACTR2P61160 394 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 KRT76Q01546 638 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 EPHA7Q15375 998 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 CSPP1Q1MSJ5 1256 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 HSDL1Q3SXM5 330 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 RESP18Q5W5W9 173 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 ZNF746Q6NUN9 644 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-206ENST00000474648 ABHD15Q6UXT9 468 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 DHX37Q8IY37 1157 aaKnown RBP11.27□□□□□ -0.61
COL8A1-206ENST00000474648 LENG1Q96BZ8 264 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-206ENST00000474648 AK8Q96MA6 479 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 HSD17B14Q9BPX1 270 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 MLXIPQ9HAP2 919 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 JPH1Q9HDC5 661 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-206ENST00000474648 PRDM10Q9NQV6 1147 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 SLC9A2Q9UBY0 812 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 LRWD1Q9UFC0 647 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 Q9Y3F1 56 aa11.27□□□□□ -0.61
COL8A1-206ENST00000474648 PLXNA1Q9UIW2 1896 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 IGKV6D-21A0A0A0MT36 114 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 CTAGE5O15320 804 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 DYNC1LI2O43237 492 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-206ENST00000474648 CHMP2AO43633 222 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 DUSP11O75319 330 aaKnown RBP11.26□□□□□ -0.61
COL8A1-206ENST00000474648 SLITRK3O94933 977 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 SPATA31C1P0DKV0 1188 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 NKX3-2P78367 333 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 PKN2Q16513 984 aaKnown RBP11.26□□□□□ -0.61
COL8A1-206ENST00000474648 ECM1Q16610 540 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 TMEM266Q2M3C6 531 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 NCAPH2Q6IBW4 605 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 FBXO46Q6PJ61 603 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-206ENST00000474648 MIER3Q7Z3K6 550 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
COL8A1-206ENST00000474648 SPATA33Q96N06 139 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 PCYT2Q99447 389 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 GPR20Q99678 358 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 EIF2AK1Q9BQI3 630 aaKnown RBP11.26□□□□□ -0.61
COL8A1-206ENST00000474648 CCSER1Q9C0I3 900 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 GOLPH3LQ9H4A5 285 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 DISC1Q9NRI5 854 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 HPSEQ9Y251 543 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 LRRC37A2A6NM11 1700 aa11.26□□□□□ -0.61
COL8A1-206ENST00000474648 A0A087X0B3 334 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 A6NJR5 290 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 WDR64B1ANS9 1081 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 MED24O75448 989 aa11.25□□□□□ -0.61
COL8A1-206ENST00000474648 HOXD8P13378 290 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms