RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 VSTM4Q8IW00 320 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 ETNPPLQ8TBG4 499 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 NSUN6Q8TEA1 469 aaKnown RBP23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 FERMT2Q96AC1 680 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 HSD3B7Q9H2F3 369 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 ZFYVE28Q9HCC9 887 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 ZNF446Q9NWS9 450 aa23.21■■□□□ 1.31
SMIM11A-204ENST00000474455 ORC2Q13416 577 aaPredicted RBP23.2■■□□□ 1.3
SMIM11A-204ENST00000474455 ERCC6LQ2NKX8 1250 aa23.2■■□□□ 1.3
SMIM11A-204ENST00000474455 GPR142Q7Z601 462 aa23.2■■□□□ 1.3
SMIM11A-204ENST00000474455 MXRA8Q9BRK3 442 aa23.2■■□□□ 1.3
SMIM11A-204ENST00000474455 HOOK1Q9UJC3 728 aaKnown RBP23.2■■□□□ 1.3
SMIM11A-204ENST00000474455 DNAJC25-GNG10A0A024R161 153 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 MEIS1O00470 390 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 LAD1O00515 517 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 COPB2P35606 906 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 PRPHP41219 470 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 ALDH5A1P51649 535 aaPredicted RBP23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 VSIG10LQ86VR7 867 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 SYMPKQ92797 1274 aaKnown RBP23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 DNAI1Q9UI46 699 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 LRRC37A2A6NM11 1700 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 POTEMA6NI47 508 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 COBLO75128 1261 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 RGS20O76081 388 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 SERPINC1P01008 464 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 ZNF579Q8NAF0 562 aaKnown RBP23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 NAP1L4Q99733 375 aaKnown RBP23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 UBIAD1Q9Y5Z9 338 aa23.19■■□□□ 1.3
SMIM11A-204ENST00000474455 A0A087X0B3 334 aa23.18■■□□□ 1.3
SMIM11A-204ENST00000474455 ARHGAP6O43182 974 aa23.18■■□□□ 1.3
SMIM11A-204ENST00000474455 CA12O43570 354 aa23.18■■□□□ 1.3
SMIM11A-204ENST00000474455 ADORA2AP29274 412 aa23.18■■□□□ 1.3
SMIM11A-204ENST00000474455 UBXN4Q92575 508 aa23.18■■□□□ 1.3
SMIM11A-204ENST00000474455 PKD2L1Q9P0L9 805 aa23.18■■□□□ 1.3
SMIM11A-204ENST00000474455 MARCH6O60337 910 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 TBC1D8O95759 1140 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 CTGFP29279 349 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 TRIM65Q6PJ69 517 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 PDILTQ8N807 584 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 DNERQ8NFT8 737 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 EFCAB8A8MWE9 144 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 CLCN6P51797 869 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 ARHGAP29Q52LW3 1261 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 MAF1Q9H063 256 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 KCNH7Q9NS40 1196 aa23.17■■□□□ 1.3
SMIM11A-204ENST00000474455 WDR81Q562E7 1941 aa23.16■■□□□ 1.3
SMIM11A-204ENST00000474455 CCND2P30279 289 aa23.16■■□□□ 1.3
SMIM11A-204ENST00000474455 REXO1L1PQ8IX06 675 aa23.16■■□□□ 1.3
SMIM11A-204ENST00000474455 IGSF22Q8N9C0 903 aa23.16■■□□□ 1.3
SMIM11A-204ENST00000474455 MNS1Q8NEH6 495 aa23.16■■□□□ 1.3
SMIM11A-204ENST00000474455 JADE2Q9NQC1 790 aa23.16■■□□□ 1.3
SMIM11A-204ENST00000474455 PCDHA12Q9UN75 941 aa23.16■■□□□ 1.3
SMIM11A-204ENST00000474455 FHOD1Q9Y613 1164 aa23.16■■□□□ 1.3
SMIM11A-204ENST00000474455 ATP9AO75110 1047 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 ATP1A3P13637 1013 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 LONP1P36776 959 aaKnown RBP23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 SEMA3FQ13275 785 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 KRBA2Q6ZNG9 492 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 EEPD1Q7L9B9 569 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 PLEKHH3Q7Z736 793 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 NUDT12Q9BQG2 462 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 BCAS3Q9H6U6 928 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 DACH1Q9UI36 760 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 ZRANB2O95218 330 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 TMCO3Q6UWJ1 677 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 KCNH3Q9ULD8 1083 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 IVNS1ABPQ9Y6Y0 642 aa23.15■■□□□ 1.3
SMIM11A-204ENST00000474455 POLR2DO15514 142 aaKnown RBP23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 TADA3O75528 432 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 MAPK4P31152 587 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 FXR2P51116 673 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 CAP1Q01518 475 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 SPIRE1Q08AE8 756 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 TBX2Q13207 712 aaPredicted RBP23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 MTMR1Q13613 665 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 GRB14Q14449 540 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 ZNF792Q3KQV3 632 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 PLIN2Q99541 437 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 ZNF577Q9BSK1 485 aa23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 MMTAG2Q9BU76 263 aaKnown RBP23.14■■□□□ 1.29
SMIM11A-204ENST00000474455 TRPA1O75762 1119 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 EDNRBP24530 442 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 IWS1Q96ST2 819 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 ARHGAP39Q9C0H5 1083 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 ADD3Q9UEY8 706 aaKnown RBP23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 DDX39AO00148 427 aaKnown RBP23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 TBX3O15119 743 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 STRNO43815 780 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 PSMD10O75832 226 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 PNMA6AP0CW24 399 aaPredicted RBP23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 ITGB3BPQ13352 177 aaPredicted RBP23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 KARSQ15046 597 aaKnown RBP23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 STXBP2Q15833 593 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 LONRF3Q496Y0 759 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 SLFN12Q8IYM2 578 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 CNNM3Q8NE01 707 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 LRRC15Q8TF66 581 aa23.13■■□□□ 1.29
SMIM11A-204ENST00000474455 SLC5A5Q92911 643 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms