RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 KRT18P05783 430 aaKnown RBP6.7□□□□□ -1.34
HERC4-209ENST00000473533 PLEKP08567 350 aaPredicted RBP6.7□□□□□ -1.34
HERC4-209ENST00000473533 FERP16591 822 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 CALRP27797 417 aaKnown RBP6.7□□□□□ -1.34
HERC4-209ENST00000473533 EHHADHQ08426 723 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 COASYQ13057 564 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 EZH2Q15910 746 aaKnown RBP6.7□□□□□ -1.34
HERC4-209ENST00000473533 SKIDA1Q1XH10 827 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 TRIM59Q8IWR1 403 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 CASKIN2Q8WXE0 1202 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 TBC1D5Q92609 795 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 TAOK3Q9H2K8 898 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 KLC4Q9NSK0 619 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 BLOC1S4Q9NUP1 217 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 SUCLA2Q9P2R7 463 aaPredicted RBP6.7□□□□□ -1.34
HERC4-209ENST00000473533 TFR2Q9UP52 801 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 ZNF831Q5JPB2 1677 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 NAV1Q8NEY1 1877 aa6.7□□□□□ -1.34
HERC4-209ENST00000473533 C10orf71Q711Q0 1435 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 LOC102724428A0A0B4J2F2 783 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 FAM187AA6NFU0 413 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 KCNK3O14649 394 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 SLC16A3O15427 465 aaKnown RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 GLI1P08151 1106 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 GSTA1P08263 222 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 H2AFZP0C0S5 128 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 CXCR5P32302 372 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 PRKCIP41743 596 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 SIK1P57059 783 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 H2AFVQ71UI9 128 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 TEX2Q8IWB9 1127 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 ZC3H3Q8IXZ2 948 aaKnown RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 SLFN12Q8IYM2 578 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 SCFD2Q8WU76 684 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 EYA3Q99504 573 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 MMTAG2Q9BU76 263 aaKnown RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 IL17RBQ9NRM6 502 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 BTG4Q9NY30 223 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 TTC7AQ9ULT0 858 aaPredicted RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 ATAD5Q96QE3 1844 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 KIF13BQ9NQT8 1826 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 A0A1B0GUA9 196 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 GTPBP10A4D1E9 387 aaKnown RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 C5orf60A6NFR6 353 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 CCDC169A6NNP5 214 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 NCK2O43639 380 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 CEP104O60308 925 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 KRT14P02533 472 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 AFPP02771 609 aaKnown RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 FNTAP49354 379 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 GUCY2FP51841 1108 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 ZCWPW2Q504Y3 356 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 LACTB2Q53H82 288 aaPredicted RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 KCTD16Q68DU8 428 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 C16orf86Q6ZW13 317 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 PEX26Q7Z412 305 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 CPLX4Q7Z7G2 160 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 CUL5Q93034 780 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 CYFIP2Q96F07 1278 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 KDM4CQ9H3R0 1056 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 RIOX1Q9H6W3 641 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 NLRC4Q9NPP4 1024 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 DOT1LQ8TEK3 1739 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 WNK3Q9BYP7 1800 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 SLIT2O94813 1529 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 KRIT1O00522 736 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 RAD51CO43502 376 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 TRAPPC3O43617 180 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 USP17L8P0C7I0 530 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 LMNB1P20700 586 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 DHX34Q14147 1143 aaKnown RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 MOXD1Q6UVY6 613 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 STXBP4Q6ZWJ1 553 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 DYMQ7RTS9 669 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 UBLCP1Q8WVY7 318 aaPredicted RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 PNMA5Q96PV4 448 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 PSMD1Q99460 953 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.69□□□□□ -1.34
HERC4-209ENST00000473533 ARMCX3Q9UH62 379 aaPredicted RBP6.69□□□□□ -1.34
HERC4-209ENST00000473533 AMFRQ9UKV5 643 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 PLIN4Q96Q06 1357 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 MYO3BQ8WXR4 1341 aa6.69□□□□□ -1.34
HERC4-209ENST00000473533 CFAP73A6NFT4 308 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 FTCDO95954 541 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 CYP2D6P10635 497 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 RFX1P22670 979 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 KLRC1P26715 233 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 ATP5DP30049 168 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 HSD17B3P37058 310 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 GUCY1A3Q02108 690 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 IFT88Q13099 833 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 BYSLQ13895 437 aaKnown RBP6.68□□□□□ -1.34
HERC4-209ENST00000473533 KLHL7Q8IXQ5 586 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 PLCD3Q8N3E9 789 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 RASGEF1CQ8N431 466 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 PSMB7Q99436 277 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 CENPHQ9H3R5 247 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 CXorf56Q9H5V9 222 aa6.68□□□□□ -1.34
HERC4-209ENST00000473533 MTRF1LQ9UGC7 380 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms