RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SSRP1Q08945 709 aaKnown RBP25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 STK3Q13188 491 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 CPLX2Q6PUV4 134 aaKnown RBP25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 NIPA1Q7RTP0 329 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 SERINC5Q86VE9 423 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 ATP6V0A1Q93050 837 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 WNT8BQ93098 351 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 PBX4Q9BYU1 374 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 FTOQ9C0B1 505 aaKnown RBP eCLIP25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 RNPEPQ9H4A4 650 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 JPH1Q9HDC5 661 aaPredicted RBP25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 VPS54Q9P1Q0 977 aa25.71■■□□□ 1.71
PTP4A1-203ENST00000473334 COL6A3P12111 3177 aa25.7■■□□□ 1.71
PTP4A1-203ENST00000473334 TET1Q8NFU7 2136 aa25.7■■□□□ 1.71
PTP4A1-203ENST00000473334 ADAMTS3O15072 1205 aa25.7■■□□□ 1.7
PTP4A1-203ENST00000473334 GNAT1P11488 350 aa25.7■■□□□ 1.7
PTP4A1-203ENST00000473334 CRYGNQ8WXF5 182 aa25.7■■□□□ 1.7
PTP4A1-203ENST00000473334 TIFAQ96CG3 184 aa25.7■■□□□ 1.7
PTP4A1-203ENST00000473334 SDF4Q9BRK5 362 aa25.7■■□□□ 1.7
PTP4A1-203ENST00000473334 AGO4Q9HCK5 861 aaKnown RBP25.7■■□□□ 1.7
PTP4A1-203ENST00000473334 SH3GLB2Q9NR46 395 aa25.7■■□□□ 1.7
PTP4A1-203ENST00000473334 SLC9A2Q9UBY0 812 aa25.7■■□□□ 1.7
PTP4A1-203ENST00000473334 CYP3A4P08684 503 aa25.69■■□□□ 1.7
PTP4A1-203ENST00000473334 PBX2P40425 430 aa25.69■■□□□ 1.7
PTP4A1-203ENST00000473334 SETD4Q9NVD3 440 aa25.69■■□□□ 1.7
PTP4A1-203ENST00000473334 KAT6AQ92794 2004 aa25.69■■□□□ 1.7
PTP4A1-203ENST00000473334 EMSYQ7Z589 1322 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 TREHO43280 583 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 DEXIO95424 95 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 GPNMBQ14956 572 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 RAB30Q15771 203 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 ZNF618Q5T7W0 954 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 TRAF7Q6Q0C0 670 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 IL17RAQ96F46 866 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 ERAP1Q9NZ08 941 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 MSRAQ9UJ68 235 aa25.68■■□□□ 1.7
PTP4A1-203ENST00000473334 FAM86B1E9PN63 330 aa25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 CXCL10P02778 98 aa25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 FAM86B2P0C5J1 330 aa25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 ITGB3BPQ13352 177 aaPredicted RBP25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 PLA2G4DQ86XP0 818 aa25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 RASGRP4Q8TDF6 673 aa25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 GLG1Q92896 1179 aa25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 CDX2Q99626 313 aaPredicted RBP25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 SMARCAD1Q9H4L7 1026 aa25.67■■□□□ 1.7
PTP4A1-203ENST00000473334 NRCAMQ92823 1304 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 NBNO60934 754 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 LGR5O75473 907 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 BAIAP3O94812 1187 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 ATP2A2P16615 1042 aaKnown RBP25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 THPOP40225 353 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 NLRP5P59047 1200 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 ADAM17P78536 824 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 ANKRD1Q15327 319 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 LMBR1Q8WVP7 490 aa25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 SLKQ9H2G2 1235 aaPredicted RBP25.66■■□□□ 1.7
PTP4A1-203ENST00000473334 IGLV3-22A0A075B6J6 115 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 CAND2O75155 1236 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 CDKL5O76039 1030 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 MARK3P27448 753 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 ACTR2P61160 394 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 SETQ01105 290 aaPredicted RBP25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 SCRN1Q12765 414 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 CNKSR3Q6P9H4 555 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 SLC9A7Q96T83 725 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 ZNF576Q9H609 170 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 TPCN1Q9ULQ1 816 aa25.65■■□□□ 1.7
PTP4A1-203ENST00000473334 AK2P54819 239 aa25.64■■□□□ 1.7
PTP4A1-203ENST00000473334 PPFIA1Q13136 1202 aa25.64■■□□□ 1.7
PTP4A1-203ENST00000473334 FAM177A1Q8N128 213 aaPredicted RBP25.64■■□□□ 1.7
PTP4A1-203ENST00000473334 PCYT2Q99447 389 aa25.64■■□□□ 1.7
PTP4A1-203ENST00000473334 AZI2Q9H6S1 392 aa25.64■■□□□ 1.7
PTP4A1-203ENST00000473334 RSPH10B2B2RC85 870 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 PFKFB2O60825 505 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 RSPH10BP0C881 870 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 CIITAP33076 1130 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 RABGGTBP53611 331 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 MBTPS1Q14703 1052 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 PHOSPHO2Q8TCD6 241 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 MYLIPQ8WY64 445 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 PCDHA4Q9UN74 947 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 YBX2Q9Y2T7 364 aaKnown RBP25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 PCDHA11Q9Y5I1 949 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 CDH23Q9H251 3354 aa25.63■■□□□ 1.69
PTP4A1-203ENST00000473334 DDX39AO00148 427 aaKnown RBP25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 SEC24BO95487 1268 aa25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 KCNJ6P48051 423 aa25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 GRIK4Q16099 956 aa25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 ZNF577Q9BSK1 485 aa25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 NKX2-4Q9H2Z4 354 aa25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 CHD9Q3L8U1 2897 aa25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 PTPRSQ13332 1948 aa25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 STK36Q9NRP7 1315 aa25.62■■□□□ 1.69
PTP4A1-203ENST00000473334 IPO5O00410 1097 aaKnown RBP25.61■■□□□ 1.69
PTP4A1-203ENST00000473334 ATG7O95352 703 aa25.61■■□□□ 1.69
PTP4A1-203ENST00000473334 GRIN2CQ14957 1233 aa25.61■■□□□ 1.69
PTP4A1-203ENST00000473334 PLPPR4Q7Z2D5 763 aa25.61■■□□□ 1.69
PTP4A1-203ENST00000473334 AIFM3Q96NN9 605 aa25.61■■□□□ 1.69
PTP4A1-203ENST00000473334 C22orf23Q9BZE7 217 aa25.61■■□□□ 1.69
PTP4A1-203ENST00000473334 DHX15O43143 795 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms